RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TTLL12Q14166 644 aaPredicted RBP16.15■□□□□ 0.18
VLDLR-202ENST00000382099 MIIPQ5JXC2 388 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 TMEM53Q6P2H8 277 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 LRRC8BQ6P9F7 803 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 IZUMO2Q6UXV1 221 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 VPS52Q8N1B4 723 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 ANKLE1Q8NAG6 615 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 NAPBQ9H115 298 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 LY9Q9HBG7 655 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 NKIRAS1Q9NYS0 192 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 MYH6P13533 1939 aa16.15■□□□□ 0.18
VLDLR-202ENST00000382099 PHRF1Q9P1Y6 1649 aaKnown RBP16.15■□□□□ 0.18
VLDLR-202ENST00000382099 CCDC188H7C350 402 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 MAPK13O15264 365 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 FGGP02679 453 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 VCAM1P19320 739 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 MTTPP55157 894 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 SH3D19Q5HYK7 790 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 STKLD1Q8NE28 680 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 HAPLN3Q96S86 360 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 TMEM59LQ9UK28 342 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 BICDL2A1A5D9 508 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
VLDLR-202ENST00000382099 ACSL3O95573 720 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 BRAFP15056 766 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 CDK7P50613 346 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 SATL1Q86VE3 508 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
VLDLR-202ENST00000382099 HPS3Q969F9 1004 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
VLDLR-202ENST00000382099 ARPP21Q9UBL0 812 aaPredicted RBP16.14■□□□□ 0.17
VLDLR-202ENST00000382099 TMEM247A6NEH6 219 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 NFKBIAP25963 317 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 POLR2FP61218 127 aaKnown RBP16.13■□□□□ 0.17
VLDLR-202ENST00000382099 AUHQ13825 339 aaKnown RBP16.13■□□□□ 0.17
VLDLR-202ENST00000382099 CYLC2Q14093 348 aaPredicted RBP16.13■□□□□ 0.17
VLDLR-202ENST00000382099 DHRS1Q96LJ7 313 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 TAOK3Q9H2K8 898 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 A0A087X0T9 212 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 SIGLEC16A6NMB1 481 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 TXNDC9O14530 226 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 PDE5AO76074 875 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 FAM228BP0C875 321 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 CCR3P51677 355 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 DR1Q01658 176 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 SOS2Q07890 1332 aaPredicted RBP16.13■□□□□ 0.17
VLDLR-202ENST00000382099 PPP2R5CQ13362 524 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 LRRC36Q1X8D7 754 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 WDR72Q3MJ13 1102 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 RNF43Q68DV7 783 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 PDXDC1Q6P996 788 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 KBTBD2Q8IY47 623 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 WASF2Q9Y6W5 498 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 P4HA2O15460 535 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 POLGP54098 1239 aaPredicted RBP16.13■□□□□ 0.17
VLDLR-202ENST00000382099 ASIC1P78348 528 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 KLHL30Q0D2K2 578 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 KCTD21Q4G0X4 260 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 CC2D2BQ6DHV5 1058 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 SLC15A3Q8IY34 581 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 TTLL11Q8NHH1 800 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 IGDCC4Q8TDY8 1250 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 HSPBAP1Q96EW2 488 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 SLITRK6Q9H5Y7 841 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 INIPQ9NRY2 104 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 SEC63Q9UGP8 760 aaKnown RBP16.13■□□□□ 0.17
VLDLR-202ENST00000382099 CHKBQ9Y259 395 aa16.13■□□□□ 0.17
VLDLR-202ENST00000382099 A0A087WZG4 1122 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 PP2D1A8MPX8 630 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 PGM3O95394 542 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 LCA5LO95447 670 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 NUDT17P0C025 328 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 VARSP26640 1264 aaKnown RBP16.12■□□□□ 0.17
VLDLR-202ENST00000382099 CLCN2P51788 898 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 DNAJC3Q13217 504 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 ACSBG2Q5FVE4 666 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 FIGNQ5HY92 759 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 C4orf50Q6ZRC1 276 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 PIK3AP1Q6ZUJ8 805 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 CCDC84Q86UT8 332 aaPredicted RBP16.12■□□□□ 0.17
VLDLR-202ENST00000382099 KCNH5Q8NCM2 988 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 ESR2Q92731 530 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 TTC1Q99614 292 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 METTL22Q9BUU2 404 aaPredicted RBP16.12■□□□□ 0.17
VLDLR-202ENST00000382099 MTRF1LQ9UGC7 380 aaKnown RBP16.12■□□□□ 0.17
VLDLR-202ENST00000382099 RTCBQ9Y3I0 505 aaKnown RBP16.12■□□□□ 0.17
VLDLR-202ENST00000382099 MYH2Q9UKX2 1941 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 ASMTLO95671 621 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 BMP15O95972 392 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 CCNE1P24864 410 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 NCSTNQ92542 709 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 MKL1Q969V6 931 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 ARPC5LQ9BPX5 153 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 PPP1R9AQ9ULJ8 1098 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 TSC22D4Q9Y3Q8 395 aa16.12■□□□□ 0.17
VLDLR-202ENST00000382099 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 LDHAP00338 332 aaKnown RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 HNRNPH3P31942 346 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms