RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 MCM4P33991 863 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 ZNF131P52739 623 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 MDM2Q00987 491 aaPredicted RBP17.12■□□□□ 0.33
PDGFB-202ENST00000381551 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 ZNF410Q86VK4 478 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 GRAMD1CQ8IYS0 662 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 FDXACB1Q9BRP7 624 aaPredicted RBP17.12■□□□□ 0.33
PDGFB-202ENST00000381551 NTPCRQ9BSD7 190 aaKnown RBP17.12■□□□□ 0.33
PDGFB-202ENST00000381551 OSBPL7Q9BZF2 842 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 GINS2Q9Y248 185 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 NBNO60934 754 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 PLS3P13797 630 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 EIF4BP23588 611 aaKnown RBP17.11■□□□□ 0.33
PDGFB-202ENST00000381551 CASP1P29466 404 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 PTENP60484 403 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 CUL4BQ13620 913 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 CAPSQ13938 189 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 TFDP1Q14186 410 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 FBXO47Q5MNV8 452 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 TMEM199Q8N511 208 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 TMEM40Q8WWA1 233 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 NLRP7Q8WX94 980 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 BADQ92934 168 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 VWCEQ96DN2 955 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 IFT74Q96LB3 600 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 NLRP4Q96MN2 994 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 OSMRQ99650 979 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 KCNG1Q9UIX4 513 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 SQORQ9Y6N5 450 aa17.11■□□□□ 0.33
PDGFB-202ENST00000381551 TNRC18O15417 2968 aaPredicted RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 FRMD3A2A2Y4 597 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 MYL1P05976 194 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 DARSP14868 501 aaKnown RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 CSF2RAP15509 400 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 RFC2P35250 354 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 NAMPTP43490 491 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 NPTX2P47972 431 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 PEX3P56589 373 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 LPIN1Q14693 890 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 PPP2R5AQ15172 486 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 ELOA2Q8IYF1 753 aaPredicted RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 MYCT1Q8N699 235 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 SPIRE2Q8WWL2 714 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 AGO3Q9H9G7 860 aaKnown RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 PARVGQ9HBI0 331 aa17.1■□□□□ 0.33
PDGFB-202ENST00000381551 LARSQ9P2J5 1176 aaKnown RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 NOC2LQ9Y3T9 749 aaKnown RBP17.1■□□□□ 0.33
PDGFB-202ENST00000381551 PDE4DIPQ5VU43 2346 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 KINO60870 393 aaKnown RBP17.09■□□□□ 0.33
PDGFB-202ENST00000381551 TBCAO75347 108 aaKnown RBP17.09■□□□□ 0.33
PDGFB-202ENST00000381551 CSDE1O75534 798 aaKnown RBP17.09■□□□□ 0.33
PDGFB-202ENST00000381551 FAM13AO94988 1023 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 CXCL10P02778 98 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 USP38Q8NB14 1042 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 GPT2Q8TD30 523 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 CCDC34Q96HJ3 373 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 SCLT1Q96NL6 688 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 INO80BQ9C086 356 aaPredicted RBP17.09■□□□□ 0.33
PDGFB-202ENST00000381551 ZHX3Q9H4I2 956 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 MINDY3Q9H8M7 445 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 PANK4Q9NVE7 773 aa17.09■□□□□ 0.33
PDGFB-202ENST00000381551 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 LRRIQ4A6NIV6 560 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 CCDC169A6NNP5 214 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 H0YGN5 161 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 TRAK2O60296 914 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 RPS6KA5O75582 802 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 PRR29P0C7W0 189 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 GHRP10912 638 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 IDEP14735 1019 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 GAP43P17677 238 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 PHKA2P46019 1235 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 SMTNP53814 917 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 ASIC1P78348 528 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 DPYDQ12882 1025 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 DMP1Q13316 513 aaPredicted RBP17.08■□□□□ 0.32
PDGFB-202ENST00000381551 HERC4Q5GLZ8 1057 aaPredicted RBP17.08■□□□□ 0.32
PDGFB-202ENST00000381551 ODR4Q5SWX8 454 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 CDCA2Q69YH5 1023 aaPredicted RBP17.08■□□□□ 0.32
PDGFB-202ENST00000381551 TSHZ1Q6ZSZ6 1077 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 C16orf59Q7L2K0 433 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.32
PDGFB-202ENST00000381551 FIZ1Q96SL8 496 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.32
PDGFB-202ENST00000381551 KMT5AQ9NQR1 393 aa17.08■□□□□ 0.32
PDGFB-202ENST00000381551 ADGRA3Q8IWK6 1321 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 KLRC4O43908 158 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 FPGSQ05932 587 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms