RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PLCG1P19174 1290 aa21.51■■□□□ 1.03
GTF3A-201ENST00000381140 TXLNAP40222 546 aa21.51■■□□□ 1.03
GTF3A-201ENST00000381140 DHX8Q14562 1220 aaKnown RBP21.51■■□□□ 1.03
GTF3A-201ENST00000381140 MXD4Q14582 209 aaPredicted RBP21.51■■□□□ 1.03
GTF3A-201ENST00000381140 HERC6Q8IVU3 1022 aa21.51■■□□□ 1.03
GTF3A-201ENST00000381140 TMX1Q9H3N1 280 aa21.51■■□□□ 1.03
GTF3A-201ENST00000381140 DENND3A2RUS2 1198 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 ENPP3O14638 875 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 ASAP2O43150 1006 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 SLC26A4O43511 780 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 MYOGP15173 224 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 GLRA2P23416 452 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 ARL2P36404 184 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 TFDP1Q14186 410 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 ATL3Q6DD88 541 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 PHOSPHO2Q8TCD6 241 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 LINC01599Q8WXQ3 324 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 RUSC1Q9BVN2 902 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 FTHL17Q9BXU8 183 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 PBX4Q9BYU1 374 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 CCSER1Q9C0I3 900 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 MSRAQ9UJ68 235 aa21.5■■□□□ 1.03
GTF3A-201ENST00000381140 LRRIQ4A6NIV6 560 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 PPP6R2O75170 966 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 PLA2G4BP0C869 781 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 DNAJB2P25686 324 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 PHKA2P46019 1235 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 ME1P48163 572 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 RAD51AP2Q09MP3 1159 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 CAPSQ13938 189 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 RTN4RL1Q86UN2 441 aaPredicted RBP21.49■■□□□ 1.03
GTF3A-201ENST00000381140 ADAM2Q99965 735 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 INO80BQ9C086 356 aaPredicted RBP21.49■■□□□ 1.03
GTF3A-201ENST00000381140 IFT122Q9HBG6 1241 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 CCDC39Q9UFE4 941 aa21.49■■□□□ 1.03
GTF3A-201ENST00000381140 MORC2Q9Y6X9 1032 aaPredicted RBP21.49■■□□□ 1.03
GTF3A-201ENST00000381140 TLL1O43897 1013 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 MGEA5O60502 916 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 SFPQP23246 707 aaKnown RBP eCLIP21.48■■□□□ 1.03
GTF3A-201ENST00000381140 RAB30Q15771 203 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 RINT1Q6NUQ1 792 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 CATSPER4Q7RTX7 472 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 KCNG4Q8TDN1 519 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 PANK2Q9BZ23 570 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 NKX2-4Q9H2Z4 354 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 YBX2Q9Y2T7 364 aaKnown RBP21.48■■□□□ 1.03
GTF3A-201ENST00000381140 ATP6V1DQ9Y5K8 247 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 LAMA3Q16787 3333 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 CUTAO60888 179 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 KRT85P78386 507 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 MCM6Q14566 821 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 SRGAP1Q7Z6B7 1085 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 SYT2Q8N9I0 419 aaPredicted RBP21.48■■□□□ 1.03
GTF3A-201ENST00000381140 LRRC15Q8TF66 581 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 BSNDQ8WZ55 320 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 RAD54LQ92698 747 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 TIFAQ96CG3 184 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 MINDY3Q9H8M7 445 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 PCDHA11Q9Y5I1 949 aa21.48■■□□□ 1.03
GTF3A-201ENST00000381140 INO80B-WBP1J3KQ70 363 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 HIP1RO75146 1068 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 ZSCAN20P17040 1043 aaPredicted RBP21.47■■□□□ 1.03
GTF3A-201ENST00000381140 SLC12A3P55017 1021 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 TPRNQ4KMQ1 711 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 RRAGBQ5VZM2 374 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 GPBP1Q86WP2 473 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 KCTD17Q8N5Z5 321 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 PDILTQ8N807 584 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 SPATA32Q96LK8 384 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 GBP4Q96PP9 640 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 TSPYL2Q9H2G4 693 aaPredicted RBP21.47■■□□□ 1.03
GTF3A-201ENST00000381140 BLOC1S4Q9NUP1 217 aa21.47■■□□□ 1.03
GTF3A-201ENST00000381140 NPHP3-ACAD11A0A0J9YXS1 232 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 GJB5O95377 273 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 LIG1P18858 919 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 PTENP60484 403 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 CACNB1Q02641 598 aaPredicted RBP21.46■■□□□ 1.03
GTF3A-201ENST00000381140 C1orf186Q6ZWK4 172 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 KIFAP3Q92845 792 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 IFT74Q96LB3 600 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 FAM161BQ96MY7 647 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 RCOR1Q9UKL0 485 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 LRFN2Q9ULH4 789 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 PCDHA7Q9UN72 937 aa21.46■■□□□ 1.03
GTF3A-201ENST00000381140 PIN4Q9Y237 131 aaKnown RBP21.46■■□□□ 1.03
GTF3A-201ENST00000381140 ERLIN2O94905 339 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 KRT18P05783 430 aaKnown RBP21.45■■□□□ 1.02
GTF3A-201ENST00000381140 CA3P07451 260 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 STAT6P42226 847 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 DSC3Q14574 896 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 ZNF697Q5TEC3 545 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 Q7L0L9 218 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 DEPTORQ8TB45 409 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 LARP4BQ92615 738 aaKnown RBP21.45■■□□□ 1.02
GTF3A-201ENST00000381140 TOP1MTQ969P6 601 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 YME1L1Q96TA2 773 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 RGS18Q9NS28 235 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 C1orf112Q9NSG2 853 aa21.45■■□□□ 1.02
GTF3A-201ENST00000381140 NLRC5Q86WI3 1866 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 A0A087X0B3 334 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms