RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 GBP1P32455 592 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 MAN1A1P33908 653 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 ERICH1Q86X53 443 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 VPS33BQ9H267 617 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 MED24O75448 989 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 ABL1P00519 1130 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 RFX1P22670 979 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 TAB3Q8N5C8 712 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 RNF10Q8N5U6 811 aaKnown RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 NSMCE1Q8WV22 266 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 PPANQ9NQ55 473 aaKnown RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 H7C0C1 242 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 STAMBPO95630 424 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 ATP5OP48047 213 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 ITIH3Q06033 890 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 GLYCTKQ8IVS8 523 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 CTAGE3PQ8IX95 158 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 TC2NQ8N9U0 490 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 TMEM35BQ8NCS4 154 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 MRIQ9BWK5 157 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 FAM114A2Q9NRY5 505 aa13.19□□□□□ -0.3
GABPB1-203ENST00000380877 ADARB2Q9NS39 739 aaKnown RBP13.19□□□□□ -0.3
GABPB1-203ENST00000380877 KRT1P04264 644 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 EPHB4P54760 987 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 LMNB2Q03252 620 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 C9orf131Q5VYM1 1079 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 ZNF746Q6NUN9 644 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-203ENST00000380877 BBOF1Q8ND07 529 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 LMO7Q8WWI1 1683 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 SRGAP2O75044 1071 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 KCNJ6P48051 423 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 SNX1Q13596 522 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 TAF1CQ15572 869 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-203ENST00000380877 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 PDZD4Q76G19 769 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-203ENST00000380877 PALM2Q8IXS6 379 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 PDE11AQ9HCR9 933 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 MED4Q9NPJ6 270 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 FAM198AQ9UFP1 575 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 SCINQ9Y6U3 715 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 LRRD1A4D1F6 860 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
GABPB1-203ENST00000380877 GPC3P51654 580 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 GPC5P78333 572 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 FKBP1CQ5VVH2 108 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 TWF2Q6IBS0 349 aaKnown RBP13.18□□□□□ -0.3
GABPB1-203ENST00000380877 GPRASP2Q96D09 838 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 LRRC4Q9HBW1 653 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 ANAPC7Q9UJX3 599 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 NFIBO00712 420 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
GABPB1-203ENST00000380877 METTL23Q86XA0 190 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 RFX6Q8HWS3 928 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 OR6B3Q8NGW1 331 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 AP1M1Q9BXS5 423 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 UNC45AQ9H3U1 944 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 IFT122Q9HBG6 1241 aa13.18□□□□□ -0.3
GABPB1-203ENST00000380877 CCL15-CCL14A0A0B4J2E2 113 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
GABPB1-203ENST00000380877 ARP10275 920 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-203ENST00000380877 SOX5P35711 763 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 PLTPP55058 493 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 CCL15Q16663 113 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 RINT1Q6NUQ1 792 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 PASD1Q8IV76 773 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 CALN1Q9BXU9 219 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 TRIM7Q9C029 511 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 ATRNO75882 1429 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 MYCP01106 439 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-203ENST00000380877 RWDD2BP57060 319 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
GABPB1-203ENST00000380877 LMBRD2Q68DH5 695 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-203ENST00000380877 CAPN12Q6ZSI9 719 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 PNMA8AQ86V59 439 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-203ENST00000380877 ERO1BQ86YB8 467 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 NME8Q8N427 588 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 FBF1Q8TES7 1133 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 ANKEF1Q9NU02 776 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 ECEL1O95672 775 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 FGGP02679 453 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 GYPCP04921 128 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 FMO5P49326 533 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 MXRA7P84157 204 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 EVX2Q03828 476 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 EMC2Q15006 297 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 SETDB1Q15047 1291 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 P3H4Q92791 437 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 C11orf70Q9BRQ4 267 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 IRX2Q9BZI1 471 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-203ENST00000380877 SMARCAD1Q9H4L7 1026 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 ABCC6O95255 1503 aa13.17□□□□□ -0.3
GABPB1-203ENST00000380877 MIF4GDA9UHW6 222 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms