RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 OR6B2Q6IFH4 312 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 CCDC149Q6ZUS6 474 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 RETREG2Q8NC44 543 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 ATP8B4Q8TF62 1192 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 RNF139Q8WU17 664 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 CEP170P1Q96L14 293 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 A0A087WWV3 80 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 AXIN1O15169 862 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 TSC22D2O75157 780 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 ATF2P15336 505 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 EIF2AK2P19525 551 aaKnown RBP11.47□□□□□ -0.57
CLCN4-202ENST00000380833 ATN1P54259 1190 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-202ENST00000380833 MYOCDQ8IZQ8 938 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 NEK9Q8TD19 979 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 CAPSLQ8WWF8 208 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 CALN1Q9BXU9 219 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 SEC31BQ9NQW1 1179 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 DAPK2Q9UIK4 370 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 ATP10AO60312 1499 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 A2MP01023 1474 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 SNTNA6NMZ2 147 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 PFDN6O15212 129 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 CRKLP46109 303 aaKnown RBP11.47□□□□□ -0.57
CLCN4-202ENST00000380833 MYL7Q01449 175 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 CCDC153Q494R4 210 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 GREM2Q9H772 168 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 ZWILCHQ9H900 591 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 PKD2L2Q9NZM6 624 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 ARL2BPQ9Y2Y0 163 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 ADORA1P30542 326 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 IL12RB1P42701 662 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 YWHAHQ04917 246 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-202ENST00000380833 FAM180AQ6UWF9 173 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 GRAMD1AQ96CP6 724 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 COG4Q9H9E3 785 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 ASAP1Q9ULH1 1129 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 BLIDQ8IZY5 108 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 SMYD3Q9H7B4 428 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 CD209Q9NNX6 404 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.57
CLCN4-202ENST00000380833 ATXN10Q9UBB4 475 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 SH3BP1Q9Y3L3 701 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 DENND3A2RUS2 1198 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 FAM196BA6NMK8 535 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 LZTS3O60299 673 aaPredicted RBP11.46□□□□□ -0.57
CLCN4-202ENST00000380833 TFDP1Q14186 410 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 TMED2Q15363 201 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 SF3B3Q15393 1217 aaKnown RBP11.46□□□□□ -0.57
CLCN4-202ENST00000380833 SWT1Q5T5J6 900 aaKnown RBP11.46□□□□□ -0.57
CLCN4-202ENST00000380833 PEX5LQ8IYB4 626 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 VIPAS39Q9H9C1 493 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 AP4S1Q9Y587 144 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 PI4K2BG5E9Z4 385 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
CLCN4-202ENST00000380833 PGM3O95394 542 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 HMOX2P30519 316 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 CBX3Q13185 183 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 ADCK5Q3MIX3 580 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 SDE2Q6IQ49 451 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 MIS18BP1Q6P0N0 1132 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 MAML1Q92585 1016 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 EZH1Q92800 747 aaPredicted RBP11.46□□□□□ -0.57
CLCN4-202ENST00000380833 LRRC4Q9HBW1 653 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 ARPP21Q9UBL0 812 aaPredicted RBP11.46□□□□□ -0.57
CLCN4-202ENST00000380833 TBK1Q9UHD2 729 aa11.46□□□□□ -0.57
CLCN4-202ENST00000380833 ADAM9Q13443 819 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 CNGA2Q16280 664 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 TAS2R42Q7RTR8 314 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 SMYD4Q8IYR2 804 aaPredicted RBP11.46□□□□□ -0.58
CLCN4-202ENST00000380833 SLC26A7Q8TE54 656 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 OTULINQ96BN8 352 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 ATP6V1G3Q96LB4 118 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 PNMA2Q9UL42 364 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 SLC8A2Q9UPR5 921 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 ABCC2Q92887 1545 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 KCNJ18B7U540 433 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 GOLGA8TH3BQL2 631 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 ATP2B4P23634 1241 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 ADD1P35611 737 aaKnown RBP11.46□□□□□ -0.58
CLCN4-202ENST00000380833 RPS6KA3P51812 740 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 GRIN1Q05586 938 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 PUDPQ08623 228 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 KCNJ12Q14500 433 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 C16orf72Q14CZ0 275 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 FAM47EQ6ZV65 393 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 KDELC2Q7Z4H8 507 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 DYNLL2Q96FJ2 89 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.58
CLCN4-202ENST00000380833 RNF181Q9P0P0 153 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 PRXQ9BXM0 1461 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 CFLARO15519 480 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 GPC4O75487 556 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 DSG1Q02413 1049 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 ATP1A4Q13733 1029 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 THOC5Q13769 683 aaKnown RBP11.46□□□□□ -0.58
CLCN4-202ENST00000380833 TCP11X2Q5H9J9 407 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 SIX6OS1Q8N1H7 587 aa11.46□□□□□ -0.58
CLCN4-202ENST00000380833 NMD3Q96D46 503 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms