RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 RAG1P15918 1043 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 MDM2Q00987 491 aaPredicted RBP14.02□□□□□ -0.16
SMN1-202ENST00000380707 CUL4BQ13620 913 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 CAPSQ13938 189 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 MBTPS1Q14703 1052 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 LRRC8DQ7L1W4 858 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 GPT2Q8TD30 523 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 NLRP7Q8WX94 980 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 SCLYQ96I15 445 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 DRC1Q96MC2 740 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 NLRP4Q96MN2 994 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 OSMRQ99650 979 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 LRRC27Q9C0I9 530 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 IFT122Q9HBG6 1241 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 PRKAG2Q9UGJ0 569 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 ODF2LQ9ULJ1 636 aa14.02□□□□□ -0.16
SMN1-202ENST00000380707 ZMYND8Q9ULU4 1186 aaPredicted RBP14.02□□□□□ -0.16
SMN1-202ENST00000380707 A0A087WZ62 844 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 M0QZ92 97 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 ASAP2O43150 1006 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 ZNF131P52739 623 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 CDC42EP1Q00587 391 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 GPNMBQ14956 572 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 CNNM4Q6P4Q7 775 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 TMEM40Q8WWA1 233 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 TIGD1Q96MW7 591 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 FDXACB1Q9BRP7 624 aaPredicted RBP14.01□□□□□ -0.17
SMN1-202ENST00000380707 TRPV2Q9Y5S1 764 aa14.01□□□□□ -0.17
SMN1-202ENST00000380707 KINO60870 393 aaKnown RBP14□□□□□ -0.17
SMN1-202ENST00000380707 NBNO60934 754 aa14□□□□□ -0.17
SMN1-202ENST00000380707 TBCAO75347 108 aaKnown RBP14□□□□□ -0.17
SMN1-202ENST00000380707 CSDE1O75534 798 aaKnown RBP14□□□□□ -0.17
SMN1-202ENST00000380707 PRR29P0C7W0 189 aa14□□□□□ -0.17
SMN1-202ENST00000380707 PLS3P13797 630 aa14□□□□□ -0.17
SMN1-202ENST00000380707 NPTX2P47972 431 aa14□□□□□ -0.17
SMN1-202ENST00000380707 CRYBB1P53674 252 aaPredicted RBP14□□□□□ -0.17
SMN1-202ENST00000380707 PEX3P56589 373 aa14□□□□□ -0.17
SMN1-202ENST00000380707 MFSD5Q6N075 450 aa14□□□□□ -0.17
SMN1-202ENST00000380707 KANK3Q6NY19 840 aa14□□□□□ -0.17
SMN1-202ENST00000380707 ZNF410Q86VK4 478 aa14□□□□□ -0.17
SMN1-202ENST00000380707 ZNF710Q8N1W2 664 aa14□□□□□ -0.17
SMN1-202ENST00000380707 MYCT1Q8N699 235 aa14□□□□□ -0.17
SMN1-202ENST00000380707 IFT74Q96LB3 600 aa14□□□□□ -0.17
SMN1-202ENST00000380707 SCLT1Q96NL6 688 aa14□□□□□ -0.17
SMN1-202ENST00000380707 ZHX3Q9H4I2 956 aa14□□□□□ -0.17
SMN1-202ENST00000380707 MINDY3Q9H8M7 445 aa14□□□□□ -0.17
SMN1-202ENST00000380707 PARVGQ9HBI0 331 aa14□□□□□ -0.17
SMN1-202ENST00000380707 NR2E3Q9Y5X4 410 aa14□□□□□ -0.17
SMN1-202ENST00000380707 FRMD3A2A2Y4 597 aa14□□□□□ -0.17
SMN1-202ENST00000380707 LRRIQ4A6NIV6 560 aa14□□□□□ -0.17
SMN1-202ENST00000380707 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
SMN1-202ENST00000380707 FAM13AO94988 1023 aa14□□□□□ -0.17
SMN1-202ENST00000380707 IDEP14735 1019 aa14□□□□□ -0.17
SMN1-202ENST00000380707 EIF4BP23588 611 aaKnown RBP14□□□□□ -0.17
SMN1-202ENST00000380707 NAMPTP43490 491 aa14□□□□□ -0.17
SMN1-202ENST00000380707 PTENP60484 403 aa14□□□□□ -0.17
SMN1-202ENST00000380707 ASIC1P78348 528 aa14□□□□□ -0.17
SMN1-202ENST00000380707 DMP1Q13316 513 aaPredicted RBP14□□□□□ -0.17
SMN1-202ENST00000380707 TFDP1Q14186 410 aa14□□□□□ -0.17
SMN1-202ENST00000380707 LPIN1Q14693 890 aa14□□□□□ -0.17
SMN1-202ENST00000380707 FBXO47Q5MNV8 452 aa14□□□□□ -0.17
SMN1-202ENST00000380707 ODR4Q5SWX8 454 aa14□□□□□ -0.17
SMN1-202ENST00000380707 BADQ92934 168 aa14□□□□□ -0.17
SMN1-202ENST00000380707 VWCEQ96DN2 955 aa14□□□□□ -0.17
SMN1-202ENST00000380707 KIFC3Q9BVG8 833 aa14□□□□□ -0.17
SMN1-202ENST00000380707 C17orf75Q9HAS0 396 aa14□□□□□ -0.17
SMN1-202ENST00000380707 PANK4Q9NVE7 773 aa14□□□□□ -0.17
SMN1-202ENST00000380707 ADGRA3Q8IWK6 1321 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 SIP14410 1827 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 CCDC169A6NNP5 214 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 KLRC4O43908 158 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 MYL1P05976 194 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 GHRP10912 638 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 DARSP14868 501 aaKnown RBP13.99□□□□□ -0.17
SMN1-202ENST00000380707 CSF2RAP15509 400 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 POU5F1BQ06416 359 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 DPYDQ12882 1025 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 PNOCQ13519 176 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 POSTNQ15063 836 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 PPP2R5AQ15172 486 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 CDCA2Q69YH5 1023 aaPredicted RBP13.99□□□□□ -0.17
SMN1-202ENST00000380707 ERCC4Q92889 916 aaPredicted RBP13.99□□□□□ -0.17
SMN1-202ENST00000380707 FIZ1Q96SL8 496 aa13.99□□□□□ -0.17
SMN1-202ENST00000380707 NTPCRQ9BSD7 190 aaKnown RBP13.99□□□□□ -0.17
SMN1-202ENST00000380707 GCOM2Q9BZD3 368 aaPredicted RBP13.99□□□□□ -0.17
SMN1-202ENST00000380707 AGO3Q9H9G7 860 aaKnown RBP13.99□□□□□ -0.17
SMN1-202ENST00000380707 LARSQ9P2J5 1176 aaKnown RBP13.99□□□□□ -0.17
SMN1-202ENST00000380707 NOC2LQ9Y3T9 749 aaKnown RBP13.99□□□□□ -0.17
SMN1-202ENST00000380707 SLC16A4O15374 487 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 FGFR4P22455 802 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 PHKA2P46019 1235 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 COASYQ13057 564 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 CAMK4Q16566 473 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 HERC4Q5GLZ8 1057 aaPredicted RBP13.98□□□□□ -0.17
SMN1-202ENST00000380707 UNC13DQ70J99 1090 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 DEFB128Q7Z7B8 93 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 SFR1Q86XK3 245 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 IFNLR1Q8IU57 520 aaPredicted RBP13.98□□□□□ -0.17
SMN1-202ENST00000380707 CCDC65Q8IXS2 484 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms