RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CETN1Q12798 172 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 ZNF572Q7Z3I7 529 aaPredicted RBP25.21■■□□□ 1.63
VPS16-201ENST00000380443 HAUS6Q7Z4H7 955 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 KIFAP3Q92845 792 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.21■■□□□ 1.63
VPS16-201ENST00000380443 HDAC6Q9UBN7 1215 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 HYOU1Q9Y4L1 999 aa25.21■■□□□ 1.63
VPS16-201ENST00000380443 BACH1O14867 736 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 PMM2O15305 246 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 MOCS3O95396 460 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 IFI16Q16666 785 aaKnown RBP25.2■■□□□ 1.62
VPS16-201ENST00000380443 SPIRE2Q8WWL2 714 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 MLXIPQ9HAP2 919 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 A1CFQ9NQ94 594 aaKnown RBP25.2■■□□□ 1.62
VPS16-201ENST00000380443 RNF14Q9UBS8 474 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 FBXO40Q9UH90 709 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 INTUQ9ULD6 942 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 CAPN6Q9Y6Q1 641 aa25.2■■□□□ 1.62
VPS16-201ENST00000380443 SPATA31C2B4DYI2 1134 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 RTP1P59025 263 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 C1QTNF8P60827 252 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 UGCGQ16739 394 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 KSR1Q8IVT5 923 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 A0A087X0T9 212 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 SPDYE4A6NLX3 237 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 FAM228BP0C875 321 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 PNMA6AP0CW24 399 aaPredicted RBP25.19■■□□□ 1.62
VPS16-201ENST00000380443 SCP2P22307 547 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 CBX1P83916 185 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 APBA1Q02410 837 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 PTK2Q05397 1052 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 WDR93Q6P2C0 686 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 XXYLT1Q8NBI6 393 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 ARID3AQ99856 593 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 NTPCRQ9BSD7 190 aaKnown RBP25.19■■□□□ 1.62
VPS16-201ENST00000380443 ADAMTS1Q9UHI8 967 aa25.19■■□□□ 1.62
VPS16-201ENST00000380443 TARSL2A2RTX5 802 aaKnown RBP25.18■■□□□ 1.62
VPS16-201ENST00000380443 ICAM3P32942 547 aa25.18■■□□□ 1.62
VPS16-201ENST00000380443 JPH1Q9HDC5 661 aaPredicted RBP25.18■■□□□ 1.62
VPS16-201ENST00000380443 LOC285556D6RIA3 1793 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 H0YCG3 227 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 MYL7Q01449 175 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 ARID5AQ03989 594 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 ENPEPQ07075 957 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 MAEAQ7L5Y9 396 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 MCPH1Q8NEM0 835 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 CAGE1Q8TC20 777 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 EPC1Q9H2F5 836 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 SLC9A2Q9UBY0 812 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 SNCAIPQ9Y6H5 919 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 PFASO15067 1338 aa25.17■■□□□ 1.62
VPS16-201ENST00000380443 SOX5P35711 763 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 DMP1Q13316 513 aaPredicted RBP25.16■■□□□ 1.62
VPS16-201ENST00000380443 KIAA0753Q2KHM9 967 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 CCDC70Q6NSX1 233 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 ZNF571Q7Z3V5 609 aaPredicted RBP25.16■■□□□ 1.62
VPS16-201ENST00000380443 MSL3Q8N5Y2 521 aaKnown RBP25.16■■□□□ 1.62
VPS16-201ENST00000380443 RUBCNQ92622 972 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 DCPSQ96C86 337 aaKnown RBP25.16■■□□□ 1.62
VPS16-201ENST00000380443 MMS19Q96T76 1030 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 PCDHGC5Q9Y5F6 944 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 CSADQ9Y600 493 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 EIF3JO75822 258 aaKnown RBP25.16■■□□□ 1.62
VPS16-201ENST00000380443 DGAT1O75907 488 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 PEX3P56589 373 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 STXBP2Q15833 593 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 FAM102BQ5T8I3 360 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 MIS18BP1Q6P0N0 1132 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.16■■□□□ 1.62
VPS16-201ENST00000380443 ANO5Q75V66 913 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 INTS2Q9H0H0 1204 aaKnown RBP25.16■■□□□ 1.62
VPS16-201ENST00000380443 GABBR1Q9UBS5 961 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 APEX2Q9UBZ4 518 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 USP20Q9Y2K6 914 aa25.16■■□□□ 1.62
VPS16-201ENST00000380443 RGS20O76081 388 aa25.15■■□□□ 1.62
VPS16-201ENST00000380443 VAMP7P51809 220 aa25.15■■□□□ 1.62
VPS16-201ENST00000380443 PLS1Q14651 629 aa25.15■■□□□ 1.62
VPS16-201ENST00000380443 UTP14CQ5TAP6 766 aaKnown RBP25.15■■□□□ 1.62
VPS16-201ENST00000380443 LBX2Q6XYB7 198 aa25.15■■□□□ 1.62
VPS16-201ENST00000380443 OSBPL9Q96SU4 736 aa25.15■■□□□ 1.62
VPS16-201ENST00000380443 IKZF4Q9H2S9 585 aa25.15■■□□□ 1.62
VPS16-201ENST00000380443 HSPBP1Q9NZL4 362 aa25.15■■□□□ 1.62
VPS16-201ENST00000380443 NENFQ9UMX5 172 aa25.15■■□□□ 1.62
VPS16-201ENST00000380443 SRGAP2O75044 1071 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 NAP1L1P55209 391 aaKnown RBP25.14■■□□□ 1.62
VPS16-201ENST00000380443 VGLL4Q14135 290 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 ABHD15Q6UXT9 468 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 RIOX2Q8IUF8 465 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 CREG2Q8IUH2 290 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 MAP4K3Q8IVH8 894 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 SULF1Q8IWU6 871 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 NAGPAQ9UK23 515 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 DNAJC12Q9UKB3 198 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 TBX20Q9UMR3 447 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 FZD1Q9UP38 647 aa25.14■■□□□ 1.62
VPS16-201ENST00000380443 A0A0A6YYK5 440 aaPredicted RBP25.14■■□□□ 1.61
VPS16-201ENST00000380443 STBD1O95210 358 aa25.14■■□□□ 1.61
VPS16-201ENST00000380443 CBWD6Q4V339 395 aa25.14■■□□□ 1.61
VPS16-201ENST00000380443 CBWD3Q5JTY5 395 aa25.14■■□□□ 1.61
VPS16-201ENST00000380443 CBWD5Q5RIA9 395 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms