RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 LRRC1Q9BTT6 524 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 KCND2Q9NZV8 630 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 CNOT7Q9UIV1 285 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 DOCK1Q14185 1865 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 LRRN2O75325 713 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 TCP1P17987 556 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 FMO5P49326 533 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 TNFAIP1Q13829 316 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 NSMFQ6X4W1 530 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 ZNF572Q7Z3I7 529 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 OLIG1Q8TAK6 271 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 CALR3Q96L12 384 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 RMDN3Q96TC7 470 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 PCIF1Q9H4Z3 704 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 GPRC5CQ9NQ84 441 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 DMGDHQ9UI17 866 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 NAGPAQ9UK23 515 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 TARSL2A2RTX5 802 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 GRID2IPA4D2P6 1211 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 K7ENM7 598 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 GFPT2O94808 682 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 CCNE2O96020 404 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 DLG4P78352 724 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 IRX3P78415 501 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 SLC7A5Q01650 507 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 PTPROQ16827 1216 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 HS2ST1Q7LGA3 356 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 NIPA1Q7RTP0 329 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 SYCP3Q8IZU3 236 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 GLMNQ92990 594 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 TELO2Q9Y4R8 837 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 PCDHGC5Q9Y5F6 944 aa8.69□□□□□ -1.02
PDLIM5-204ENST00000380176 GTPBP10A4D1E9 387 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 VWA5AO00534 786 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 YWHABP31946 246 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 PRKCIP41743 596 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 QARSP47897 775 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 NPEPPSP55786 919 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 ALKBH5Q6P6C2 394 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 RNF207Q6ZRF8 634 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 MMGT1Q8N4V1 131 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 MRRFQ96E11 262 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 PDCD2LQ9BRP1 358 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 GPR88Q9GZN0 384 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 PXMP2Q9NR77 195 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 RBM12Q9NTZ6 932 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 FBXL5Q9UKA1 691 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 FRMD4BQ9Y2L6 1034 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 POLR2AP24928 1970 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 PHIPQ8WWQ0 1821 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 BACH1O14867 736 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 EVI5O60447 810 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 EXOC3O60645 756 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 TUBBP07437 444 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 RNASE9P60153 205 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 MEI1Q5TIA1 1274 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 PLA2G4FQ68DD2 849 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 CCNI2Q6ZMN8 369 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 NEK9Q8TD19 979 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 CBWD1Q9BRT8 395 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 MKNK1Q9BUB5 465 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 DNAJC12Q9UKB3 198 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 NENFQ9UMX5 172 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 UBE4BO95155 1302 aa8.68□□□□□ -1.02
PDLIM5-204ENST00000380176 DDX3XO00571 662 aaKnown RBP eCLIP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 MAFGO15525 162 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 PPP1R12BO60237 982 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 RPS12P25398 132 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 BACE1P56817 501 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 BFSP1Q12934 665 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 BAATQ14032 418 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 CCDC181Q5TID7 509 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 TXLNBQ8N3L3 684 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 LNX1Q8TBB1 728 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 PLEKHA4Q9H4M7 779 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 DBR1Q9UK59 544 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 BZW2Q9Y6E2 419 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 F8VZ95 297 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 ZBED4O75132 1171 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 HMGCS2P54868 508 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 DRAP1Q14919 205 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 ARHGEF16Q5VV41 709 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 PHLDB3Q6NSJ2 640 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 STXBP4Q6ZWJ1 553 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 LMO3Q8TAP4 145 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 WRNIP1Q96S55 665 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 RNF146Q9NTX7 359 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 TBC1D22BQ9NU19 505 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 LARSQ9P2J5 1176 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 TRPC6Q9Y210 931 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 CTDP1Q9Y5B0 961 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 ZNF541Q9H0D2 1346 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 SLC16A4O15374 487 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 PLS3P13797 630 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 PTPRAP18433 802 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 TNNT3P45378 269 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 PEX3P56589 373 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 SOX10P56693 466 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms