RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LINC01465Q8N7H1 131 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 FEZF2Q8TBJ5 459 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 CRYGNQ8WXF5 182 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 MRPL9Q9BYD2 267 aaKnown RBP20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 DISC1Q9NRI5 854 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 NRBP2Q9NSY0 501 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 A0A0U1RQF3 1178 aa20.07■□□□□ 0.8
PDLIM4-202ENST00000379018 TMC5Q6UXY8 1006 aa20.07■□□□□ 0.8
PDLIM4-202ENST00000379018 ZNF598Q86UK7 904 aaKnown RBP20.07■□□□□ 0.8
PDLIM4-202ENST00000379018 FLCNQ8NFG4 579 aa20.07■□□□□ 0.8
PDLIM4-202ENST00000379018 GJA10Q969M2 543 aa20.07■□□□□ 0.8
PDLIM4-202ENST00000379018 GBP3Q9H0R5 595 aa20.07■□□□□ 0.8
PDLIM4-202ENST00000379018 DACT1Q9NYF0 836 aa20.07■□□□□ 0.8
PDLIM4-202ENST00000379018 SEPT9Q9UHD8 586 aaPredicted RBP20.07■□□□□ 0.8
PDLIM4-202ENST00000379018 CPA1P15085 419 aa20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 DRP2Q13474 957 aa20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 MTERF2Q49AM1 385 aa20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 ATAT1Q5SQI0 421 aa20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 TWF2Q6IBS0 349 aaKnown RBP20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 RASEFQ8IZ41 740 aa20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 CCDC12Q8WUD4 166 aaPredicted RBP20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 SH2D3AQ9BRG2 576 aa20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 ZMYND12Q9H0C1 365 aa20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 ZBP1Q9H171 429 aa20.06■□□□□ 0.8
PDLIM4-202ENST00000379018 TMEM150BA6NC51 233 aa20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 GAS7O60861 476 aa20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 EOMESO95936 686 aa20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 SSBP05455 408 aaKnown RBP eCLIP20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 RNASELQ05823 741 aaKnown RBP20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 ASTLQ6HA08 431 aaPredicted RBP20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 KIAA1841Q6NSI8 718 aa20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 FRMD5Q7Z6J6 570 aa20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 CABP7Q86V35 215 aa20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 GCOM2Q9BZD3 368 aaPredicted RBP20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 DZANK1Q9NVP4 752 aa20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 PIN4Q9Y237 131 aaKnown RBP20.05■□□□□ 0.8
PDLIM4-202ENST00000379018 RIF1Q5UIP0 2472 aaKnown RBP20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 ESYT2A0FGR8 921 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 PRR23AA6NEV1 266 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 MSH4O15457 936 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 NUBP1P53384 320 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 AKAP17AQ02040 695 aaKnown RBP20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 SKAP1Q86WV1 359 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 BCL7CQ8WUZ0 217 aaPredicted RBP20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 PHKBQ93100 1093 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 LENG9Q96B70 501 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 CCDC136Q96JN2 1154 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 TEKT3Q9BXF9 490 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 UNC45AQ9H3U1 944 aa20.04■□□□□ 0.8
PDLIM4-202ENST00000379018 FAM186AA6NE01 2351 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 SPTBN4Q9H254 2564 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 A0A087WZ62 844 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 MEIS3P2A8K0S8 358 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 GNA11P29992 359 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 PHKA2P46019 1235 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 LRCH2Q5VUJ6 765 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 IGSF21Q96ID5 467 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 FDXACB1Q9BRP7 624 aaPredicted RBP20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 NRDE2Q9H7Z3 1164 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 TBC1D13Q9NVG8 400 aa20.03■□□□□ 0.8
PDLIM4-202ENST00000379018 CCDC196A0A1B0GTZ2 297 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 CTSAP10619 480 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 SFPQP23246 707 aaKnown RBP eCLIP20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 JAK3P52333 1124 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 NOMO2Q5JPE7 1267 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 MCTP2Q6DN12 878 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 GLB1LQ6UWU2 654 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 Q6ZUG5 572 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 MIER3Q7Z3K6 550 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 DDX53Q86TM3 631 aaKnown RBP20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 RHPN2Q8IUC4 686 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 ZDHHC14Q8IZN3 488 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 ZNF710Q8N1W2 664 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 PLCD3Q8N3E9 789 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 CYP26B1Q9NR63 512 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 VPS54Q9P1Q0 977 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 DNAJB4Q9UDY4 337 aa20.02■□□□□ 0.8
PDLIM4-202ENST00000379018 MYO15AQ9UKN7 3530 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 PROB1E7EW31 1015 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 CIITAP33076 1130 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 NBL1P41271 181 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 SLC11A1P49279 550 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 CCDC149Q6ZUS6 474 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 CATSPER4Q7RTX7 472 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 BICD2Q8TD16 824 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 BRF1Q92994 677 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 NLRP4Q96MN2 994 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 SLC26A6Q9BXS9 759 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 FBXL21Q9UKT6 434 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 DENND4AQ7Z401 1863 aa20.01■□□□□ 0.79
PDLIM4-202ENST00000379018 PRPF3O43395 683 aaKnown RBP20■□□□□ 0.79
PDLIM4-202ENST00000379018 GALTP07902 379 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 MYBP10242 640 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 KLRC2P26717 231 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 SFNP31947 248 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 DNM2P50570 870 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 RCAN1P53805 252 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 KRT32Q14532 448 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 CWF19L1Q69YN2 538 aaKnown RBP20■□□□□ 0.79
PDLIM4-202ENST00000379018 KSR1Q8IVT5 923 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms