RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ENDOVQ8N8Q3 282 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 MDM1Q8TC05 714 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 SCFD1Q8WVM8 642 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 ART4Q93070 314 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 HPS3Q969F9 1004 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 FAM212AQ96EL1 285 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 MAGEB18Q96M61 343 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF570Q96NI8 536 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 PRMT1Q99873 361 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 TMX4Q9H1E5 349 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 DPH5Q9H2P9 285 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 TYW1Q9NV66 732 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 GRHL1Q9NZI5 618 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 CPSF2Q9P2I0 782 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 LGALS13Q9UHV8 139 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 RPTORQ8N122 1335 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 WNK3Q9BYP7 1800 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.996e-6■■□□□ 14.5
PTPRR-203ENST00000378778 ATP2C2O75185 946 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 PECAM1P16284 738 aaPredicted RBP8.85□□□□□ -0.99
PTPRR-203ENST00000378778 NR2F2P24468 414 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 SOX5P35711 763 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 GYG1P46976 350 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 DNA2P51530 1060 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 CCNHP51946 323 aaPredicted RBP8.85□□□□□ -0.99
PTPRR-203ENST00000378778 GALCP54803 685 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 KNOP1Q1ED39 458 aaKnown RBP8.85□□□□□ -0.99
PTPRR-203ENST00000378778 ARHGEF18Q6ZSZ5 1173 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 SLFN12Q8IYM2 578 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 DYDC1Q8WWB3 177 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 THOC1Q96FV9 657 aaKnown RBP8.85□□□□□ -0.99
PTPRR-203ENST00000378778 NAF1Q96HR8 494 aaKnown RBP8.85□□□□□ -0.99
PTPRR-203ENST00000378778 CCDC28BQ9BUN5 200 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 PLVAPQ9BX97 442 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 WNT8AQ9H1J5 351 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 LRMDAQ9H2I8 198 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 PPCSQ9HAB8 311 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 CCDC87Q9NVE4 849 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 LTBP4Q8N2S1 1624 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 TBX3O15119 743 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 DIAPH2O60879 1101 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 UNC5CO95185 931 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 PLA2G4BP0C869 781 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 ACADSP16219 412 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 GAP43P17677 238 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 VCAM1P19320 739 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 HIBADHP31937 336 aaKnown RBP8.85□□□□□ -0.99
PTPRR-203ENST00000378778 SH3BGRP55822 239 aaPredicted RBP8.85□□□□□ -0.99
PTPRR-203ENST00000378778 STRN3Q13033 797 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 SLC29A2Q14542 456 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 TSNAXIP1Q2TAA8 658 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 SLC10A5Q5PT55 438 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 ANKRD20A2Q5SQ80 823 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 SEL1L2Q5TEA6 688 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 ANKRD20A1Q5TYW2 823 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 ANKRD20A3Q5VUR7 823 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 RGS9BPQ6ZS82 235 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 ERMNQ8TAM6 284 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 WDR66Q8TBY9 1149 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 CABLES1Q8TDN4 633 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 SYT11Q9BT88 431 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 TUBB6Q9BUF5 446 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 POLD4Q9HCU8 107 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 SIX2Q9NPC8 291 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 UBN1Q9NPG3 1134 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 ETAA1Q9NY74 926 aa8.85□□□□□ -0.99
PTPRR-203ENST00000378778 LRRD1A4D1F6 860 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 SMIM22K7EJ46 135 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 EIF3DO15371 548 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 MAGEB2O15479 319 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CAMTA2O94983 1202 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 GSTA2P09210 222 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 PLCG2P16885 1265 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ATP6V1C1P21283 382 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CALB2P22676 271 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 SETDB1Q15047 1291 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 LRRC41Q15345 812 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 HERC4Q5GLZ8 1057 aaPredicted RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 SESTD1Q86VW0 696 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 RELL1Q8IUW5 271 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 BBOF1Q8ND07 529 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 SLC35G2Q8TBE7 412 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 RNPEPL1Q9HAU8 725 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 GOPCQ9HD26 462 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ABCF3Q9NUQ8 709 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ADAM22Q9P0K1 906 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CTTNBP2NLQ9P2B4 639 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 AGAP1Q9UPQ3 857 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF536O15090 1300 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CYP3A7-CYP3A51PA0A087WV96 503 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 TRAFD1O14545 582 aaPredicted RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 NDC80O14777 642 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ZPR1O75312 459 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 DCTN3O75935 186 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 SHBGP04278 402 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 GNAZP19086 355 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CYP11B2P19099 503 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ITIH2P19823 946 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 RASA1P20936 1047 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CYP3A7P24462 503 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms