RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CYP26B1Q9NR63 512 aa21.24■□□□□ 0.99
SSU72-204ENST00000378726 MYH11P35749 1972 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 DOCK5Q9H7D0 1870 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 SLC16A4O15374 487 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 FARP2O94887 1054 aaPredicted RBP21.23■□□□□ 0.99
SSU72-204ENST00000378726 AFPP02771 609 aaKnown RBP21.23■□□□□ 0.99
SSU72-204ENST00000378726 GTF2BQ00403 316 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 BRD3Q15059 726 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 LY6KQ17RY6 165 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 FAM186BQ8IYM0 893 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 SLC35F6Q8N357 371 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 BRI3BPQ8WY22 251 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 BORCS6Q96GS4 357 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 EDEM3Q9BZQ6 932 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 ST6GALNAC4Q9H4F1 302 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 DGAT1O75907 488 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 ATP4AP20648 1035 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 CYP2J2P51589 502 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 GYS2P54840 703 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 DCAF17Q5H9S7 520 aaPredicted RBP21.23■□□□□ 0.99
SSU72-204ENST00000378726 TCERG1LQ5VWI1 586 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 CEP112Q8N8E3 955 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 KIFAP3Q92845 792 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 PDLIM7Q9NR12 457 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 SLC45A1Q9Y2W3 748 aa21.23■□□□□ 0.99
SSU72-204ENST00000378726 GSTTP1A0A1W2PQM5 241 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 CCDC169A6NNP5 214 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 H3BQF6 201 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 MAP2K7O14733 419 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 NDUFA10O95299 355 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 SMTNP53814 917 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 NCKAP1LP55160 1127 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 SOX10P56693 466 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 RRAGAQ7L523 313 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 CACNA2D4Q7Z3S7 1137 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 ANKRD13CQ8N6S4 541 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 SLC17A8Q8NDX2 589 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 PNKPQ96T60 521 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 MKNK1Q9BUB5 465 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 LSM14BQ9BX40 385 aaKnown RBP21.22■□□□□ 0.99
SSU72-204ENST00000378726 MLXIPQ9HAP2 919 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 PLAGL2Q9UPG8 496 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 FRMD4BQ9Y2L6 1034 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 IGSF9BQ9UPX0 1349 aa21.22■□□□□ 0.99
SSU72-204ENST00000378726 IGKV6D-21A0A0A0MT36 114 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 NOL4O94818 638 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 GGPS1O95749 300 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 CCNA1P78396 465 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 MTERF2Q49AM1 385 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 SLC9A9Q8IVB4 645 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 HNRNPH3P31942 346 aaKnown RBP21.21■□□□□ 0.99
SSU72-204ENST00000378726 NPTX2P47972 431 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 MCPH1Q8NEM0 835 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 BAP1Q92560 729 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 SLC35C1Q96A29 364 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 NHEJ1Q9H9Q4 299 aaPredicted RBP21.21■□□□□ 0.99
SSU72-204ENST00000378726 C17orf75Q9HAS0 396 aa21.21■□□□□ 0.99
SSU72-204ENST00000378726 CTAGE9A4FU28 777 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 EXOC3O60645 756 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 ARIH2O95376 493 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 CDK17Q00537 523 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 DMP1Q13316 513 aaPredicted RBP21.2■□□□□ 0.98
SSU72-204ENST00000378726 MYBPC2Q14324 1141 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 BEND6Q5SZJ8 279 aaPredicted RBP21.2■□□□□ 0.98
SSU72-204ENST00000378726 KCNV1Q6PIU1 500 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 METTL7BQ6UX53 244 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 ANKRD23Q86SG2 305 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 NTPCRQ9BSD7 190 aaKnown RBP21.2■□□□□ 0.98
SSU72-204ENST00000378726 NLRC4Q9NPP4 1024 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 LRRC53A6NM62 1247 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 OATP04181 439 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 ARHGAP25P42331 645 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 SPRYD7Q5W111 196 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 TMEM161BQ8NDZ6 487 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 SEPT1Q8WYJ6 367 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 KMT5AQ9NQR1 393 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 XPNPEP1Q9NQW7 623 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 CEP72Q9P209 647 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 RAB21Q9UL25 225 aa21.2■□□□□ 0.98
SSU72-204ENST00000378726 APBA1Q02410 837 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 TXLNBQ8N3L3 684 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 RDH13Q8NBN7 331 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 MSANTD4Q8NCY6 345 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 BSNDQ8WZ55 320 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 PCYT2Q99447 389 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 PCIF1Q9H4Z3 704 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 ATP6V0A4Q9HBG4 840 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 TISP43B9A030 160 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 SLC9A1P19634 815 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 STAT5BP51692 787 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 POLR2FP61218 127 aaKnown RBP21.19■□□□□ 0.98
SSU72-204ENST00000378726 CCDC170Q8IYT3 715 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 HNRNPLLQ8WVV9 542 aaKnown RBP21.19■□□□□ 0.98
SSU72-204ENST00000378726 SPIRE2Q8WWL2 714 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 ZBTB9Q96C00 473 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 KIFC3Q9BVG8 833 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 TBX20Q9UMR3 447 aa21.19■□□□□ 0.98
SSU72-204ENST00000378726 WDR81Q562E7 1941 aa21.18■□□□□ 0.98
SSU72-204ENST00000378726 CYLC1P35663 651 aaPredicted RBP21.18■□□□□ 0.98
SSU72-204ENST00000378726 TCF7P36402 384 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms