RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PWP2Q15269 919 aaKnown RBP12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 SH3RF3Q8TEJ3 882 aaPredicted RBP12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 KLC4Q9NSK0 619 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 SCINQ9Y6U3 715 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 NVLO15381 856 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 CDC27P30260 824 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 ANGPTL8Q6UXH0 198 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 RHOT2Q8IXI1 618 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 MMTAG2Q9BU76 263 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 CCDC188H7C350 402 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 NMT2O60551 498 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 IQCB1Q15051 598 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 DCAF4L1Q3SXM0 396 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 EXT2Q93063 718 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 KRT82Q9NSB4 513 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 FGFR1OP2Q9NVK5 253 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 EIF2AK2P19525 551 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 HPS4Q9NQG7 708 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 LY9Q9HBG7 655 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 PPARGC1AQ9UBK2 798 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 COASYQ13057 564 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 LRRC14Q15048 493 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 NBPF9Q3BBW0 867 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 SLC7A3Q8WY07 619 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 OSBPL1AQ9BXW6 950 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 RAVER2Q9HCJ3 691 aaKnown RBP12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 TMEM260Q9NX78 707 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 ANAPC7Q9UJX3 599 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 STK36Q9NRP7 1315 aa12.8□□□□□ -0.36
PCDHA9-201ENST00000378122 CTIFO43310 598 aaKnown RBP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 TJP3O95049 919 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 HSPA4LO95757 839 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 ZBED1O96006 694 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 MCF2P10911 925 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 TMPRSS15P98073 1019 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 FBXL21Q9UKT6 434 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 PPP1R2P3Q6NXS1 205 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 AFG1LQ8WV93 481 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 ATP6V1G3Q96LB4 118 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 TGS1Q96RS0 853 aaKnown RBP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 PRR23AA6NEV1 266 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 USP17L5A8MUK1 530 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 ZNF185O15231 689 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 XPOTO43592 962 aaKnown RBP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 MTF1Q14872 753 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 TRIM55Q9BYV6 548 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 QRICH2Q9H0J4 1663 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 NLRP1Q9C000 1473 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 HEG1Q9ULI3 1381 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 COPEO14579 308 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 ATP5HO75947 161 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 RANBP1P43487 201 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 GUCY1A3Q02108 690 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 SFR1Q86XK3 245 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 STRBPQ96SI9 672 aaKnown RBP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 IGFLR1Q9H665 355 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 ADGRG1Q9Y653 693 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 PEX3P56589 373 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 C1orf146Q5VVC0 180 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 BHMT2Q9H2M3 363 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 KRT10P13645 584 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 PFKFB3Q16875 520 aaPredicted RBP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 EPHA10Q5JZY3 1008 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 C16orf87Q6PH81 154 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 CATSPER4Q7RTX7 472 aa12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 SRRM1Q8IYB3 904 aaKnown RBP12.79□□□□□ -0.36
PCDHA9-201ENST00000378122 GRID2IPA4D2P6 1211 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 C6orf222P0C671 652 aaPredicted RBP12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 SRLQ86TD4 932 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 ERICH1Q86X53 443 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 MSTO1Q9BUK6 570 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 NUP85Q9BW27 656 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 CHGBP05060 677 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 ZBTB41Q5SVQ8 909 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 WDR24Q96S15 920 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 ANO9A1A5B4 782 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 E9PMD0 336 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 DPF2Q92785 391 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 TRIM15Q9C019 465 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 CNOT8Q9UFF9 292 aaKnown RBP12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 CAPN11Q9UMQ6 739 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 CDC42BPBQ9Y5S2 1711 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 PSAPP07602 524 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 RAD23BP54727 409 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 SHC4Q6S5L8 630 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 RFX8Q6ZV50 586 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 CPVLQ9H3G5 476 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 POLD4Q9HCU8 107 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms