RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 KSR1Q8IVT5 923 aa14.68□□□□□ -0.06
CKAP2-202ENST00000378034 PHOSPHO2Q8TCD6 241 aa14.68□□□□□ -0.06
CKAP2-202ENST00000378034 DRC1Q96MC2 740 aa14.68□□□□□ -0.06
CKAP2-202ENST00000378034 PYM1Q9BRP8 204 aaKnown RBP14.68□□□□□ -0.06
CKAP2-202ENST00000378034 C17orf75Q9HAS0 396 aa14.68□□□□□ -0.06
CKAP2-202ENST00000378034 IFT122Q9HBG6 1241 aa14.68□□□□□ -0.06
CKAP2-202ENST00000378034 KCNG1Q9UIX4 513 aa14.68□□□□□ -0.06
CKAP2-202ENST00000378034 SLC4A7Q9Y6M7 1214 aa14.68□□□□□ -0.06
CKAP2-202ENST00000378034 ZBBXA8MT70 800 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 SRGAP2CP0DJJ0 459 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 SFPQP23246 707 aaKnown RBP eCLIP14.67□□□□□ -0.06
CKAP2-202ENST00000378034 KCNJ6P48051 423 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 MAEAQ7L5Y9 396 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 FAM228AQ86W67 206 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 RNF149Q8NC42 400 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 ASAP3Q8TDY4 903 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 SLC9A7Q96T83 725 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 RUSC1Q9BVN2 902 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 CUEDC2Q9H467 287 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 ST3GAL5Q9UNP4 418 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 MICAL3Q7RTP6 2002 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 CMA1P23946 247 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 STAT6P42226 847 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 PTENP60484 403 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 WDR5P61964 334 aaKnown RBP14.67□□□□□ -0.06
CKAP2-202ENST00000378034 NFX1Q12986 1120 aaKnown RBP14.67□□□□□ -0.06
CKAP2-202ENST00000378034 CAPSQ13938 189 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 TCTN1Q2MV58 587 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 IFT74Q96LB3 600 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 GPRC5CQ9NQ84 441 aa14.67□□□□□ -0.06
CKAP2-202ENST00000378034 CXXC1Q9P0U4 656 aaPredicted RBP14.67□□□□□ -0.06
CKAP2-202ENST00000378034 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.66□□□□□ -0.06
CKAP2-202ENST00000378034 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.66□□□□□ -0.06
CKAP2-202ENST00000378034 NAMPTP43490 491 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 MCM6Q14566 821 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 NAALADL2Q58DX5 795 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 SV2BQ7L1I2 683 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 IQUBQ8NA54 791 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 LRRC15Q8TF66 581 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 CHAMP1Q96JM3 812 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 ZNF668Q96K58 619 aaPredicted RBP14.66□□□□□ -0.06
CKAP2-202ENST00000378034 C2orf40Q9H1Z8 148 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 ODF2LQ9ULJ1 636 aa14.66□□□□□ -0.06
CKAP2-202ENST00000378034 A0A1W2PQ27 194 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 A0A1W2PQ64 194 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 A0A1W2PQD8 194 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 HIP1RO75146 1068 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 AMHP03971 560 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 ARSHQ5FYA8 562 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 GPBP1Q86WP2 473 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 LRRC27Q9C0I9 530 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 CHST12Q9NRB3 414 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
CKAP2-202ENST00000378034 PHLPP2Q6ZVD8 1323 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 A0A087X0B3 334 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 ENPP3O14638 875 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 ATP2A2P16615 1042 aaKnown RBP14.65□□□□□ -0.06
CKAP2-202ENST00000378034 CSPP1Q1MSJ5 1256 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 HABP4Q5JVS0 413 aaKnown RBP14.65□□□□□ -0.06
CKAP2-202ENST00000378034 CDCA2Q69YH5 1023 aaPredicted RBP14.65□□□□□ -0.06
CKAP2-202ENST00000378034 ZBTB8OSQ8IWT0 167 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 PANK2Q9BZ23 570 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
CKAP2-202ENST00000378034 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 MAGEF1Q9HAY2 307 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 C1orf112Q9NSG2 853 aa14.65□□□□□ -0.06
CKAP2-202ENST00000378034 LRRIQ4A6NIV6 560 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 ZSCAN20P17040 1043 aaPredicted RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 SMAD3P84022 425 aaKnown RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 MAPK7Q13164 816 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 DHX8Q14562 1220 aaKnown RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 E2F4Q16254 413 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 CATSPER4Q7RTX7 472 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 DAW1Q8N136 415 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 PDILTQ8N807 584 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 RGS18Q9NS28 235 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 KCNH3Q9ULD8 1083 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 FAM237AA0A1B0GTK4 181 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 DENND3A2RUS2 1198 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 KRT18P05783 430 aaKnown RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 EFNA5P52803 228 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 NCBP1Q09161 790 aaKnown RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 DMP1Q13316 513 aaPredicted RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 DSC3Q14574 896 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 SPIRE2Q8WWL2 714 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 BSNDQ8WZ55 320 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 NTPCRQ9BSD7 190 aaKnown RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 TNMDQ9H2S6 317 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 DACT1Q9NYF0 836 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 LARSQ9P2J5 1176 aaKnown RBP14.64□□□□□ -0.07
CKAP2-202ENST00000378034 USP25Q9UHP3 1055 aa14.64□□□□□ -0.07
CKAP2-202ENST00000378034 MYH11P35749 1972 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 POLR2DO15514 142 aaKnown RBP14.63□□□□□ -0.07
CKAP2-202ENST00000378034 PLS3P13797 630 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 SCP2P22307 547 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 AXLP30530 894 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 AMPD3Q01432 767 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 MBTD1Q05BQ5 628 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms