RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 C1QTNF8P60827 252 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 GTF2BQ00403 316 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 DMP1Q13316 513 aaPredicted RBP23.17■■□□□ 1.3
RNF38-205ENST00000377877 KCNJ12Q14500 433 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 PTPN21Q16825 1174 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 ZNF484Q5JVG2 852 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 SPIRE2Q8WWL2 714 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 TSG101Q99816 390 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 KMT5AQ9NQR1 393 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 ZNF215Q9UL58 517 aaPredicted RBP23.17■■□□□ 1.3
RNF38-205ENST00000377877 TRAF3IP3Q9Y228 551 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 PPME1Q9Y570 386 aa23.17■■□□□ 1.3
RNF38-205ENST00000377877 PDXKO00764 312 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 PGK1P00558 417 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 GNRH1P01148 92 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 MAP2K1Q02750 393 aaPredicted RBP23.16■■□□□ 1.3
RNF38-205ENST00000377877 KRT31Q15323 416 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 FSCN1Q16658 493 aaKnown RBP23.16■■□□□ 1.3
RNF38-205ENST00000377877 PRPF31Q8WWY3 499 aaKnown RBP23.16■■□□□ 1.3
RNF38-205ENST00000377877 ST6GALNAC4Q9H4F1 302 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 INTS13Q9NVM9 706 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 LRRC10BA6NIK2 292 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 CLIC2O15247 247 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 MYL3P08590 195 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 KLRC1P26715 233 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 GTF2F1P35269 517 aaKnown RBP eCLIP23.16■■□□□ 1.3
RNF38-205ENST00000377877 CPT1AP50416 773 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 SMTNP53814 917 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 FOXR2Q6PJQ5 311 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 KAT6AQ92794 2004 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 MRFAP1L1Q96HT8 127 aa23.16■■□□□ 1.3
RNF38-205ENST00000377877 LIMA1Q9UHB6 759 aaKnown RBP23.16■■□□□ 1.3
RNF38-205ENST00000377877 C22orf31O95567 290 aa23.15■■□□□ 1.3
RNF38-205ENST00000377877 F2P00734 622 aa23.15■■□□□ 1.3
RNF38-205ENST00000377877 C6orf222P0C671 652 aaPredicted RBP23.15■■□□□ 1.3
RNF38-205ENST00000377877 GJA9P57773 515 aa23.15■■□□□ 1.3
RNF38-205ENST00000377877 FKBP3Q00688 224 aaKnown RBP23.15■■□□□ 1.3
RNF38-205ENST00000377877 EFCAB12Q6NXP0 572 aa23.15■■□□□ 1.3
RNF38-205ENST00000377877 STXBP4Q6ZWJ1 553 aa23.15■■□□□ 1.3
RNF38-205ENST00000377877 C17orf53Q8N3J3 647 aaPredicted RBP23.15■■□□□ 1.3
RNF38-205ENST00000377877 NOC3LQ8WTT2 800 aaKnown RBP23.15■■□□□ 1.3
RNF38-205ENST00000377877 IFT74Q96LB3 600 aa23.15■■□□□ 1.3
RNF38-205ENST00000377877 TYW1Q9NV66 732 aaKnown RBP23.15■■□□□ 1.3
RNF38-205ENST00000377877 TISP43B9A030 160 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 HMGCRP04035 888 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 GJB1P08034 283 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 ADAM9Q13443 819 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 KIAA0753Q2KHM9 967 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 MARCH8Q5T0T0 291 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 MAP3K21Q5TCX8 1036 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 IER5Q5VY09 327 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 METTL13Q8N6R0 699 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 PXYLP1Q8TE99 480 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 SETD4Q9NVD3 440 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 PYCARDQ9ULZ3 195 aa23.14■■□□□ 1.3
RNF38-205ENST00000377877 DENND3A2RUS2 1198 aa23.14■■□□□ 1.29
RNF38-205ENST00000377877 EDRF1Q3B7T1 1238 aa23.14■■□□□ 1.29
RNF38-205ENST00000377877 GNASQ5JWF2 1037 aa23.14■■□□□ 1.29
RNF38-205ENST00000377877 TAS1R3Q7RTX0 852 aa23.14■■□□□ 1.29
RNF38-205ENST00000377877 CNOT6LQ96LI5 555 aaKnown RBP23.14■■□□□ 1.29
RNF38-205ENST00000377877 BEGAINQ9BUH8 593 aa23.14■■□□□ 1.29
RNF38-205ENST00000377877 VPS16Q9H269 839 aa23.14■■□□□ 1.29
RNF38-205ENST00000377877 TAB2Q9NYJ8 693 aa23.14■■□□□ 1.29
RNF38-205ENST00000377877 TBX20Q9UMR3 447 aa23.14■■□□□ 1.29
RNF38-205ENST00000377877 UBE4BO95155 1302 aa23.13■■□□□ 1.29
RNF38-205ENST00000377877 TEX33O43247 280 aa23.13■■□□□ 1.29
RNF38-205ENST00000377877 CLCN3P51790 818 aa23.13■■□□□ 1.29
RNF38-205ENST00000377877 PPFIA1Q13136 1202 aa23.13■■□□□ 1.29
RNF38-205ENST00000377877 NR1I3Q14994 352 aa23.13■■□□□ 1.29
RNF38-205ENST00000377877 ZC3H3Q8IXZ2 948 aaKnown RBP23.13■■□□□ 1.29
RNF38-205ENST00000377877 ACCSQ96QU6 501 aa23.13■■□□□ 1.29
RNF38-205ENST00000377877 WBP1LQ9NX94 342 aa23.13■■□□□ 1.29
RNF38-205ENST00000377877 SUCLA2Q9P2R7 463 aaPredicted RBP23.13■■□□□ 1.29
RNF38-205ENST00000377877 DNAH12Q6ZR08 3092 aa23.13■■□□□ 1.29
RNF38-205ENST00000377877 A0A1B0GTH6 734 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 HAS3O00219 553 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 CALUO43852 315 aaPredicted RBP23.12■■□□□ 1.29
RNF38-205ENST00000377877 RARBP10826 455 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 CDC25BP30305 580 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 COPB1P53618 953 aaKnown RBP23.12■■□□□ 1.29
RNF38-205ENST00000377877 PURAQ00577 322 aaKnown RBP23.12■■□□□ 1.29
RNF38-205ENST00000377877 ALCAMQ13740 583 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 CAPSQ13938 189 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 HIC1Q14526 733 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 GRIK4Q16099 956 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 BRDTQ58F21 947 aaPredicted RBP23.12■■□□□ 1.29
RNF38-205ENST00000377877 PPP4R3CPQ6ZMV5 832 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 SYCP3Q8IZU3 236 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 GBP3Q9H0R5 595 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 UPF3AQ9H1J1 476 aaKnown RBP23.12■■□□□ 1.29
RNF38-205ENST00000377877 ARHGAP28Q9P2N2 729 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 USP20Q9Y2K6 914 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 TRIM17Q9Y577 477 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 NR2F2P24468 414 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 EEF1GP26641 437 aaKnown RBP23.12■■□□□ 1.29
RNF38-205ENST00000377877 NAMPTP43490 491 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 PSEN2P49810 448 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 LAMTOR4Q0VGL1 99 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 MFSD10Q14728 455 aa23.12■■□□□ 1.29
RNF38-205ENST00000377877 MTHFD1LQ6UB35 978 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms