RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 CEP95Q96GE4 821 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 ZBBXA8MT70 800 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 TMED8Q6PL24 325 aaPredicted RBP20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 RHPN2Q8IUC4 686 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 THOC1Q96FV9 657 aaKnown RBP20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 TRIM55Q9BYV6 548 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 POLD4Q9HCU8 107 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 TMEM260Q9NX78 707 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 POTEB3A0JP26 581 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 POTECB2RU33 542 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 CREB3O43889 395 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 POTEBQ6S5H4 581 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 SLC44A5Q8NCS7 719 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 ELAC2Q9BQ52 826 aaKnown RBP20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 PPARGC1AQ9UBK2 798 aaKnown RBP20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 PVALEFA0A1B0GWK0 134 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 GOLGA8MH3BSY2 632 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 M0QYV0 167 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 HDLBPQ00341 1268 aaKnown RBP20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 GFPT1Q06210 699 aaPredicted RBP20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 EPHA10Q5JZY3 1008 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 RMDN2Q96LZ7 410 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 PRR36Q9H6K5 1346 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 RASA4BC9J798 803 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 RASA4O43374 803 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 ESRRBO95718 433 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 SDC4P31431 198 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 PRCPP42785 496 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 ENAHQ8N8S7 591 aaPredicted RBP20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 OXER1Q8TDS5 423 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 CFAP74Q9C0B2 1584 aa20.28■□□□□ 0.84
TBC1D4-201ENST00000377625 GRAMD1BQ3KR37 738 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 DCTN3O75935 186 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 SFNP31947 248 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 SWSAP1Q6NVH7 229 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 SZRD1Q7Z422 152 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 PODNQ7Z5L7 613 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 HIPK4Q8NE63 616 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 SNAP23O00161 211 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 SRGAP2O75044 1071 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 KNOP1Q1ED39 458 aaKnown RBP20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 TTC30AQ86WT1 665 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 PFDN1O60925 122 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 MMEP08473 750 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 VAMP7P51809 220 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 TTLL4Q14679 1199 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 NRBF2Q96F24 287 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 VPS11Q9H270 941 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 SUDS3Q9H7L9 328 aaPredicted RBP20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 GABBR1Q9UBS5 961 aa20.27■□□□□ 0.84
TBC1D4-201ENST00000377625 P4HBP07237 508 aaKnown RBP20.27■□□□□ 0.83
TBC1D4-201ENST00000377625 GUCY2CP25092 1073 aa20.27■□□□□ 0.83
TBC1D4-201ENST00000377625 RNF25Q96BH1 459 aaPredicted RBP20.27■□□□□ 0.83
TBC1D4-201ENST00000377625 CALR3Q96L12 384 aaKnown RBP20.27■□□□□ 0.83
TBC1D4-201ENST00000377625 DCP1AQ9NPI6 582 aaPredicted RBP20.27■□□□□ 0.83
TBC1D4-201ENST00000377625 CYP26B1Q9NR63 512 aa20.27■□□□□ 0.83
TBC1D4-201ENST00000377625 TBXAS1P24557 533 aaPredicted RBP20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 IFNA8P32881 189 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 QARSP47897 775 aaKnown RBP20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 TTC30BQ8N4P2 665 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 CYTH2Q99418 400 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 C2orf40Q9H1Z8 148 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 APOBEC2Q9Y235 224 aaKnown RBP20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 KPNA7A9QM74 516 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 GPSM2P81274 684 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 GTSE1Q9NYZ3 720 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 CDK12Q9NYV4 1490 aaPredicted RBP20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 NUP85Q9BW27 656 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 PCSK1NQ9UHG2 260 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 NEMP1O14524 444 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 GRM4Q14833 912 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 ZNF564Q8TBZ8 553 aaPredicted RBP20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 SPATA17Q96L03 361 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 STAP1Q9ULZ2 295 aa20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 PPP1R12AO14974 1030 aaPredicted RBP20.26■□□□□ 0.83
TBC1D4-201ENST00000377625 ARID5BQ14865 1188 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 TEX2Q8IWB9 1127 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 MAGEB5Q9BZ81 275 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 TTC7AQ9ULT0 858 aaPredicted RBP20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 MROH7-TTC4A0A0A0MT08 1334 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 HNRNPCL2B2RXH8 293 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 HNRNPCL1O60812 293 aaKnown RBP20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 IGKV5-2P06315 115 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 MDM2Q00987 491 aaPredicted RBP20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 COPS2P61201 443 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 KLHL38Q2WGJ6 581 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 ACAD11Q709F0 780 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 AFG1LQ8WV93 481 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 POTEFA5A3E0 1075 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 H3BRJ5 948 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 DPYSL4O14531 572 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 CTIFO43310 598 aaKnown RBP20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 CAV1Q03135 178 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 TXNRD1Q16881 649 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 POTEGQ6S5H5 508 aa20.25■□□□□ 0.83
TBC1D4-201ENST00000377625 POTEEQ6S8J3 1075 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms