RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 FGFR4P22455 802 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 GJB2P29033 226 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 TECP42680 631 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 GATMP50440 423 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 FAM189BP81408 668 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 TMEM143Q96AN5 459 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 TUFT1Q9NNX1 390 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 CHST12Q9NRB3 414 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 BMP2KQ9NSY1 1161 aaPredicted RBP18.76■□□□□ 0.59
HMGN4-201ENST00000377575 CUL9Q8IWT3 2517 aa18.76■□□□□ 0.59
HMGN4-201ENST00000377575 PLXNA4Q9HCM2 1894 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 H3BQV1 296 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 ASAP2O43150 1006 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 DGAT1O75907 488 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 NAALADL2Q58DX5 795 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 HAUS3Q68CZ6 603 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 MCTP1Q6DN14 999 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 CATSPER4Q7RTX7 472 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 KSR1Q8IVT5 923 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 PRPF31Q8WWY3 499 aaKnown RBP18.75■□□□□ 0.59
HMGN4-201ENST00000377575 P2RX5Q93086 422 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 HLA-CQ95604 372 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 ASB2Q96Q27 587 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 COL25A1Q9BXS0 654 aaPredicted RBP18.75■□□□□ 0.59
HMGN4-201ENST00000377575 AAASQ9NRG9 546 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 SMC3Q9UQE7 1217 aa18.75■□□□□ 0.59
HMGN4-201ENST00000377575 ZBTB39O15060 712 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 CSDE1O75534 798 aaKnown RBP18.74■□□□□ 0.59
HMGN4-201ENST00000377575 XRCC6P12956 609 aaKnown RBP eCLIP18.74■□□□□ 0.59
HMGN4-201ENST00000377575 RARRES1P49788 294 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 LAMTOR4Q0VGL1 99 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 MXD4Q14582 209 aaPredicted RBP18.74■□□□□ 0.59
HMGN4-201ENST00000377575 SPOUT1Q5T280 376 aaKnown RBP18.74■□□□□ 0.59
HMGN4-201ENST00000377575 FAM102BQ5T8I3 360 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 TWF2Q6IBS0 349 aaKnown RBP18.74■□□□□ 0.59
HMGN4-201ENST00000377575 SRGAP1Q7Z6B7 1085 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 FERMT3Q86UX7 667 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 ECHDC2Q86YB7 292 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 ABI1Q8IZP0 508 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 POLR3CQ9BUI4 534 aaPredicted RBP18.74■□□□□ 0.59
HMGN4-201ENST00000377575 RAB34Q9BZG1 259 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 TMEM117Q9H0C3 514 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 NSUN3Q9H649 340 aaKnown RBP18.74■□□□□ 0.59
HMGN4-201ENST00000377575 IFT122Q9HBG6 1241 aa18.74■□□□□ 0.59
HMGN4-201ENST00000377575 PIN4Q9Y237 131 aaKnown RBP18.74■□□□□ 0.59
HMGN4-201ENST00000377575 A0A0U1RQF3 1178 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 LAD1O00515 517 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 SRGAP2CP0DJJ0 459 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 FGFR1P11362 822 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 SKIP12755 728 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 PHKA2P46019 1235 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 FXR2P51116 673 aaKnown RBP eCLIP18.73■□□□□ 0.59
HMGN4-201ENST00000377575 TFDP1Q14186 410 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 NBR1Q14596 966 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 CATSPER3Q86XQ3 398 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 LRRC43Q8N309 656 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 RNF149Q8NC42 400 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 PIGOQ8TEQ8 1089 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 BACH2Q9BYV9 841 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 XPNPEP1Q9NQW7 623 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 PCDHB12Q9Y5F1 795 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 BRWD1Q9NSI6 2320 aa18.73■□□□□ 0.59
HMGN4-201ENST00000377575 MED24O75448 989 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 EOMESO95936 686 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 SPATA31C1P0DKV0 1188 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 MUTP22033 750 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 RPA1P27694 616 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 TOB1P50616 345 aaPredicted RBP18.72■□□□□ 0.59
HMGN4-201ENST00000377575 RAB27AP51159 221 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 PCBP1Q15365 356 aaKnown RBP eCLIP18.72■□□□□ 0.59
HMGN4-201ENST00000377575 CSPP1Q1MSJ5 1256 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 RILPL1Q5EBL4 403 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 RNF169Q8NCN4 708 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 RSPH1Q8WYR4 309 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 NACC1Q96RE7 527 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 TRAIPQ9BWF2 469 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 AGPAT5Q9NUQ2 364 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 DBR1Q9UK59 544 aaKnown RBP18.72■□□□□ 0.59
HMGN4-201ENST00000377575 PCDHB6Q9Y5E3 794 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 STK24Q9Y6E0 443 aa18.72■□□□□ 0.59
HMGN4-201ENST00000377575 GRM6O15303 877 aa18.71■□□□□ 0.59
HMGN4-201ENST00000377575 USO1O60763 962 aaKnown RBP18.71■□□□□ 0.59
HMGN4-201ENST00000377575 LAG3P18627 525 aa18.71■□□□□ 0.59
HMGN4-201ENST00000377575 TFF2Q03403 129 aa18.71■□□□□ 0.59
HMGN4-201ENST00000377575 PTGDRQ13258 359 aa18.71■□□□□ 0.59
HMGN4-201ENST00000377575 POTEGQ6S5H5 508 aa18.71■□□□□ 0.59
HMGN4-201ENST00000377575 C4orf32Q8N8J7 132 aa18.71■□□□□ 0.59
HMGN4-201ENST00000377575 KLHL23Q8NBE8 558 aa18.71■□□□□ 0.59
HMGN4-201ENST00000377575 PLAGL2Q9UPG8 496 aa18.71■□□□□ 0.59
HMGN4-201ENST00000377575 ERLIN2O94905 339 aa18.7■□□□□ 0.58
HMGN4-201ENST00000377575 ITGB1P05556 798 aa18.7■□□□□ 0.58
HMGN4-201ENST00000377575 ZNF598Q86UK7 904 aaKnown RBP18.7■□□□□ 0.58
HMGN4-201ENST00000377575 MCPH1Q8NEM0 835 aa18.7■□□□□ 0.58
HMGN4-201ENST00000377575 CASD1Q96PB1 797 aa18.7■□□□□ 0.58
HMGN4-201ENST00000377575 MRPL9Q9BYD2 267 aaKnown RBP18.7■□□□□ 0.58
HMGN4-201ENST00000377575 POLR3FQ9H1D9 316 aaPredicted RBP18.7■□□□□ 0.58
HMGN4-201ENST00000377575 UBE2ZQ9H832 354 aaPredicted RBP18.7■□□□□ 0.58
HMGN4-201ENST00000377575 ALG13Q9NP73 1137 aaKnown RBP18.7■□□□□ 0.58
HMGN4-201ENST00000377575 FAM105AQ9NUU6 356 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms