RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 PTPN22Q9Y2R2 807 aa20.6■□□□□ 0.89
GPC5-201ENST00000377067 COL1A1P02452 1464 aaPredicted RBP20.59■□□□□ 0.89
GPC5-201ENST00000377067 RNF8O76064 485 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 GNA14O95837 355 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 USP17L8P0C7I0 530 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 SESN3P58005 492 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 EXOC3L4Q17RC7 722 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 KRT79Q5XKE5 535 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 SH3RF3Q8TEJ3 882 aaPredicted RBP20.59■□□□□ 0.89
GPC5-201ENST00000377067 WDR35Q9P2L0 1181 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 NENFQ9UMX5 172 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 TRPM3Q9HCF6 1732 aaPredicted RBP20.59■□□□□ 0.89
GPC5-201ENST00000377067 STARD3NLO95772 234 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 PTDSS1P48651 473 aaKnown RBP20.59■□□□□ 0.89
GPC5-201ENST00000377067 DHX34Q14147 1143 aaKnown RBP20.59■□□□□ 0.89
GPC5-201ENST00000377067 TCERG1LQ5VWI1 586 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 TTC27Q6P3X3 843 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 MTHFD1LQ6UB35 978 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 GLYCTKQ8IVS8 523 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 LNX1Q8TBB1 728 aaPredicted RBP20.59■□□□□ 0.89
GPC5-201ENST00000377067 ERP27Q96DN0 273 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 ANKRD27Q96NW4 1050 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 MTMR9Q96QG7 549 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 STX8Q9UNK0 236 aa20.59■□□□□ 0.89
GPC5-201ENST00000377067 NR2F2P24468 414 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 VPS36Q86VN1 386 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 SCFD1Q8WVM8 642 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 DNAJC9Q8WXX5 260 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 TMEM109Q9BVC6 243 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 DNAJC17Q9NVM6 304 aaKnown RBP20.58■□□□□ 0.89
GPC5-201ENST00000377067 TMOD3Q9NYL9 352 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 A0A0A6YYK5 440 aaPredicted RBP20.58■□□□□ 0.89
GPC5-201ENST00000377067 ENTPD5O75356 428 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 IGHMBP2P38935 993 aaKnown RBP20.58■□□□□ 0.89
GPC5-201ENST00000377067 GNAQP50148 359 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 TMEM266Q2M3C6 531 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 ZC3H12AQ5D1E8 599 aaKnown RBP20.58■□□□□ 0.89
GPC5-201ENST00000377067 HERC4Q5GLZ8 1057 aaPredicted RBP20.58■□□□□ 0.89
GPC5-201ENST00000377067 INTS8Q75QN2 995 aaKnown RBP20.58■□□□□ 0.89
GPC5-201ENST00000377067 KSR1Q8IVT5 923 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 ARHGEF26Q96DR7 871 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 MCM9Q9NXL9 1143 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 ARPP21Q9UBL0 812 aaPredicted RBP20.58■□□□□ 0.89
GPC5-201ENST00000377067 ZBTB1Q9Y2K1 713 aa20.58■□□□□ 0.89
GPC5-201ENST00000377067 ARAP2Q8WZ64 1704 aa20.58■□□□□ 0.88
GPC5-201ENST00000377067 AFPP02771 609 aaKnown RBP20.58■□□□□ 0.88
GPC5-201ENST00000377067 CNGA1P29973 690 aa20.58■□□□□ 0.88
GPC5-201ENST00000377067 STX2P32856 288 aa20.58■□□□□ 0.88
GPC5-201ENST00000377067 RANBP1P43487 201 aa20.58■□□□□ 0.88
GPC5-201ENST00000377067 ZNF449Q6P9G9 518 aa20.58■□□□□ 0.88
GPC5-201ENST00000377067 C6orf50Q9HD87 102 aa20.58■□□□□ 0.88
GPC5-201ENST00000377067 KLRF2D3W0D1 207 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 PRKCIP41743 596 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 MARSP56192 900 aaKnown RBP20.57■□□□□ 0.88
GPC5-201ENST00000377067 CROCCP2Q86T23 111 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 ZDHHC14Q8IZN3 488 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 PRELID2Q8N945 189 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 MARCH10Q8NA82 808 aaPredicted RBP20.57■□□□□ 0.88
GPC5-201ENST00000377067 KCTD10Q9H3F6 313 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 TXLNGQ9NUQ3 528 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 RGL1Q9NZL6 768 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 CETN3O15182 167 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 BRAFP15056 766 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 EPHB2P29323 1055 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 LBRQ14739 615 aaKnown RBP20.57■□□□□ 0.88
GPC5-201ENST00000377067 MUM1Q2TAK8 710 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 MFSD5Q6N075 450 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
GPC5-201ENST00000377067 ASAP3Q8TDY4 903 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 CARD9Q9H257 536 aa20.57■□□□□ 0.88
GPC5-201ENST00000377067 MARCKSL1P49006 195 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 DRG2P55039 364 aaKnown RBP20.56■□□□□ 0.88
GPC5-201ENST00000377067 NAP1L3Q99457 506 aaPredicted RBP20.56■□□□□ 0.88
GPC5-201ENST00000377067 GORASP1Q9BQQ3 440 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 PPP1R12CQ9BZL4 782 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 EMILIN3Q9NT22 766 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 TBK1Q9UHD2 729 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 G3BP2Q9UN86 482 aaKnown RBP20.56■□□□□ 0.88
GPC5-201ENST00000377067 E9PMD0 336 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 RARGP13631 454 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 SKIV2L2P42285 1042 aaKnown RBP20.56■□□□□ 0.88
GPC5-201ENST00000377067 KCNJ1P48048 391 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 LLGL1Q15334 1064 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 TSNAXIP1Q2TAA8 658 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 RNF43Q68DV7 783 aa20.56■□□□□ 0.88
GPC5-201ENST00000377067 CRNKL1Q9BZJ0 848 aaKnown RBP20.56■□□□□ 0.88
GPC5-201ENST00000377067 CDC42EP4Q9H3Q1 356 aaKnown RBP20.56■□□□□ 0.88
GPC5-201ENST00000377067 TMEM110-MUSTN1A8MSY1 372 aa20.55■□□□□ 0.88
GPC5-201ENST00000377067 PHF2O75151 1096 aa20.55■□□□□ 0.88
GPC5-201ENST00000377067 FXR2P51116 673 aaKnown RBP eCLIP20.55■□□□□ 0.88
GPC5-201ENST00000377067 NPEPPSP55786 919 aa20.55■□□□□ 0.88
GPC5-201ENST00000377067 SGSM1Q2NKQ1 1148 aa20.55■□□□□ 0.88
GPC5-201ENST00000377067 SUSD4Q5VX71 490 aa20.55■□□□□ 0.88
GPC5-201ENST00000377067 DGKHQ86XP1 1220 aa20.55■□□□□ 0.88
GPC5-201ENST00000377067 RFFLQ8WZ73 363 aa20.55■□□□□ 0.88
GPC5-201ENST00000377067 KRT35Q92764 455 aa20.55■□□□□ 0.88
GPC5-201ENST00000377067 PAIP2Q9BPZ3 127 aaKnown RBP20.55■□□□□ 0.88
GPC5-201ENST00000377067 SEPT11Q9NVA2 429 aaKnown RBP20.55■□□□□ 0.88
GPC5-201ENST00000377067 VCAM1P19320 739 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms