RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 IL17RAQ96F46 866 aa10.87□□□□□ -0.67
C9orf85-202ENST00000377027 RBM28Q9NW13 759 aaKnown RBP10.87□□□□□ -0.67
C9orf85-202ENST00000377027 GMPR2Q9P2T1 348 aaKnown RBP10.87□□□□□ -0.67
C9orf85-202ENST00000377027 PADI3Q9ULW8 664 aa10.87□□□□□ -0.67
C9orf85-202ENST00000377027 MRPL42Q9Y6G3 142 aaKnown RBP10.87□□□□□ -0.67
C9orf85-202ENST00000377027 MYO15AQ9UKN7 3530 aa10.87□□□□□ -0.67
C9orf85-202ENST00000377027 SMCO2A6NFE2 343 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 GOLGA8AA7E2F4 631 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 GOLGA8BA8MQT2 603 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 PI4K2BG5E9Z4 385 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 DDX39AO00148 427 aaKnown RBP10.86□□□□□ -0.67
C9orf85-202ENST00000377027 LINC01565O15544 149 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 TBX10O75333 385 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 CSPG5O95196 566 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 PLA2G5P39877 138 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 ADCY7P51828 1080 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 APOBRQ0VD83 1088 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 TMEM266Q2M3C6 531 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 JAKMIP3Q5VZ66 844 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 MRPL14Q6P1L8 145 aaKnown RBP10.86□□□□□ -0.67
C9orf85-202ENST00000377027 MTHFD1LQ6UB35 978 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 PLPPR4Q7Z2D5 763 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 ADGRD2Q7Z7M1 963 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 FIBCD1Q8N539 461 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 LENG9Q96B70 501 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 C1QTNF1Q9BXJ1 281 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 NSUN3Q9H649 340 aaKnown RBP10.86□□□□□ -0.67
C9orf85-202ENST00000377027 ALG13Q9NP73 1137 aaKnown RBP10.86□□□□□ -0.67
C9orf85-202ENST00000377027 PCDHGC5Q9Y5F6 944 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 PCDHA2Q9Y5H9 948 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 TRPV2Q9Y5S1 764 aa10.86□□□□□ -0.67
C9orf85-202ENST00000377027 KDM3AQ9Y4C1 1321 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 ZNF318Q5VUA4 2279 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 SMIM35A0A1B0GVV1 85 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 RRN3P2A6NIE6 340 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 PPFIA3O75145 1194 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 MMP1P03956 469 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 ITGB1P05556 798 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 IRS1P35568 1242 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 STAT5BP51692 787 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 ZP2Q05996 745 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 AP3B2Q13367 1082 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 NTRK3Q16288 839 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 PFKFB3Q16875 520 aaPredicted RBP10.85□□□□□ -0.67
C9orf85-202ENST00000377027 KIAA0319LQ8IZA0 1049 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 GJD3Q8N144 294 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 RASGRP4Q8TDF6 673 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 AGXT2Q9BYV1 514 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 CELF4Q9BZC1 486 aaKnown RBP10.85□□□□□ -0.67
C9orf85-202ENST00000377027 ERVK-5Q9HDB9 667 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 PCDHB11Q9Y5F2 797 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 SNX14Q9Y5W7 946 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 SQORQ9Y6N5 450 aa10.85□□□□□ -0.67
C9orf85-202ENST00000377027 MUC6Q6W4X9 2439 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 hCG_1984214I3L0E3 225 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 CDC45O75419 566 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 C22orf31O95567 290 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 FOSP01100 380 aaPredicted RBP10.84□□□□□ -0.67
C9orf85-202ENST00000377027 CYP3A4P08684 503 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 KLRC1P26715 233 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 RCAN1P53805 252 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 BTG3Q14201 252 aaPredicted RBP10.84□□□□□ -0.67
C9orf85-202ENST00000377027 PTPROQ16827 1216 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 PAN2Q504Q3 1202 aaKnown RBP10.84□□□□□ -0.67
C9orf85-202ENST00000377027 Q6ZUG5 572 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 CENPQQ7L2Z9 268 aaPredicted RBP10.84□□□□□ -0.67
C9orf85-202ENST00000377027 NIPA1Q7RTP0 329 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 RSPH3Q86UC2 560 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 ZNF713Q8N859 430 aaPredicted RBP10.84□□□□□ -0.67
C9orf85-202ENST00000377027 SDF4Q9BRK5 362 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 ZMYND12Q9H0C1 365 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 CLDND1Q9NY35 253 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 PLAGL2Q9UPG8 496 aa10.84□□□□□ -0.67
C9orf85-202ENST00000377027 NOC2LQ9Y3T9 749 aaKnown RBP10.84□□□□□ -0.67
C9orf85-202ENST00000377027 TECTAO75443 2155 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 ESYT2A0FGR8 921 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 GLP2RO95838 553 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 RB1P06400 928 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 SCG2P13521 617 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 HSPA4P34932 840 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 RBM10P98175 930 aaKnown RBP10.83□□□□□ -0.68
C9orf85-202ENST00000377027 CLUL1Q15846 466 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 TMEM31Q5JXX7 168 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 IER5Q5VY09 327 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 ZNF787Q6DD87 383 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 FAM228AQ86W67 206 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 PLA2G4DQ86XP0 818 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 RNF135Q8IUD6 432 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 NPAS4Q8IUM7 802 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 TEX2Q8IWB9 1127 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 CMTR2Q8IYT2 770 aaKnown RBP10.83□□□□□ -0.68
C9orf85-202ENST00000377027 LINC01465Q8N7H1 131 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 KLHL23Q8NBE8 558 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 SPPL3Q8TCT6 385 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 ATP8B4Q8TF62 1192 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 BRF1Q92994 677 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 PHKBQ93100 1093 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 MSLNLQ96KJ4 702 aa10.83□□□□□ -0.68
C9orf85-202ENST00000377027 ZFP42Q96MM3 310 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms