RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 BMP2KQ9NSY1 1161 aaPredicted RBP24.6■■□□□ 1.53
SRM-201ENST00000376957 MTCH2Q9Y6C9 303 aa24.6■■□□□ 1.53
SRM-201ENST00000376957 ZBTB39O15060 712 aa24.59■■□□□ 1.53
SRM-201ENST00000376957 MGEA5O60502 916 aa24.59■■□□□ 1.53
SRM-201ENST00000376957 SPATA31C1P0DKV0 1188 aa24.59■■□□□ 1.53
SRM-201ENST00000376957 DSC3Q14574 896 aa24.59■■□□□ 1.53
SRM-201ENST00000376957 CRIPAKQ8N1N5 446 aa24.59■■□□□ 1.53
SRM-201ENST00000376957 C4orf32Q8N8J7 132 aa24.59■■□□□ 1.53
SRM-201ENST00000376957 GDPD5Q8WTR4 605 aa24.59■■□□□ 1.53
SRM-201ENST00000376957 RSPH1Q8WYR4 309 aa24.59■■□□□ 1.53
SRM-201ENST00000376957 VPS37CA5D8V6 355 aaPredicted RBP24.58■■□□□ 1.53
SRM-201ENST00000376957 ARHGEF35A5YM69 484 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 EPOPA6NHQ4 379 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 H3BNC9 293 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 MED24O75448 989 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 ERLIN2O94905 339 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 EOMESO95936 686 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 BMPR1AP36894 532 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 FAM189BP81408 668 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 POU5F1BQ06416 359 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 GPM6BQ13491 265 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 SKIV2LQ15477 1246 aaKnown RBP24.58■■□□□ 1.53
SRM-201ENST00000376957 NAALADL2Q58DX5 795 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 SPOUT1Q5T280 376 aaKnown RBP24.58■■□□□ 1.53
SRM-201ENST00000376957 KSR1Q8IVT5 923 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 RNF149Q8NC42 400 aa24.58■■□□□ 1.53
SRM-201ENST00000376957 CLP1Q92989 425 aaKnown RBP24.58■■□□□ 1.53
SRM-201ENST00000376957 PIN4Q9Y237 131 aaKnown RBP24.58■■□□□ 1.53
SRM-201ENST00000376957 RALGAPA2Q2PPJ7 1873 aa24.58■■□□□ 1.52
SRM-201ENST00000376957 ARID2Q68CP9 1835 aa24.57■■□□□ 1.52
SRM-201ENST00000376957 A0A0U1RQF3 1178 aa24.57■■□□□ 1.52
SRM-201ENST00000376957 C5orf67F2Z3F1 127 aa24.57■■□□□ 1.52
SRM-201ENST00000376957 HSP90AA1P07900 732 aaKnown RBP24.57■■□□□ 1.52
SRM-201ENST00000376957 RAB27AP51159 221 aa24.57■■□□□ 1.52
SRM-201ENST00000376957 ARL6IP4Q66PJ3 421 aaKnown RBP24.57■■□□□ 1.52
SRM-201ENST00000376957 TWF2Q6IBS0 349 aaKnown RBP24.57■■□□□ 1.52
SRM-201ENST00000376957 IGSF22Q8N9C0 903 aa24.57■■□□□ 1.52
SRM-201ENST00000376957 SNX29Q8TEQ0 813 aa24.57■■□□□ 1.52
SRM-201ENST00000376957 RC3H2Q9HBD1 1191 aaKnown RBP24.57■■□□□ 1.52
SRM-201ENST00000376957 IFT122Q9HBG6 1241 aa24.57■■□□□ 1.52
SRM-201ENST00000376957 TBKBP1A7MCY6 615 aa24.56■■□□□ 1.52
SRM-201ENST00000376957 USO1O60763 962 aaKnown RBP24.56■■□□□ 1.52
SRM-201ENST00000376957 FGFR4P22455 802 aa24.56■■□□□ 1.52
SRM-201ENST00000376957 ATP2C1P98194 919 aaPredicted RBP24.56■■□□□ 1.52
SRM-201ENST00000376957 PAN2Q504Q3 1202 aaKnown RBP24.56■■□□□ 1.52
SRM-201ENST00000376957 POTEGQ6S5H5 508 aa24.56■■□□□ 1.52
SRM-201ENST00000376957 HSCBQ8IWL3 235 aa24.56■■□□□ 1.52
SRM-201ENST00000376957 RNF169Q8NCN4 708 aa24.56■■□□□ 1.52
SRM-201ENST00000376957 PCDHB12Q9Y5F1 795 aa24.56■■□□□ 1.52
SRM-201ENST00000376957 CHD9Q3L8U1 2897 aa24.56■■□□□ 1.52
SRM-201ENST00000376957 CSDE1O75534 798 aaKnown RBP24.55■■□□□ 1.52
SRM-201ENST00000376957 PDIA4P13667 645 aaKnown RBP24.55■■□□□ 1.52
SRM-201ENST00000376957 CSPP1Q1MSJ5 1256 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 SPRED2Q7Z698 418 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 ECHDC2Q86YB7 292 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 KCTD17Q8N5Z5 321 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 SNX21Q969T3 373 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 TRAIPQ9BWF2 469 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 TMEM117Q9H0C3 514 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 LMAN2LQ9H0V9 348 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 KIAA1024Q9UPX6 916 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 DNM3Q9UQ16 869 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 NLRC5Q86WI3 1866 aa24.55■■□□□ 1.52
SRM-201ENST00000376957 COL6A3P12111 3177 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 RBAK-RBAKDNI3L0D1 243 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 LPXNO60711 386 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 AXLP30530 894 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 AAK1Q2M2I8 961 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 PADI6Q6TGC4 694 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 P2RX5Q93086 422 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 PGBD4Q96DM1 585 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 MRPL38Q96DV4 380 aaKnown RBP24.54■■□□□ 1.52
SRM-201ENST00000376957 NT5C3AQ9H0P0 336 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 XPNPEP1Q9NQW7 623 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 THEGQ9P2T0 379 aa24.54■■□□□ 1.52
SRM-201ENST00000376957 INO80B-WBP1J3KQ70 363 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 ARL2P36404 184 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 PPP2R5AQ15172 486 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 TIGD5Q53EQ6 642 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 FAM102BQ5T8I3 360 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 ATXN2LQ8WWM7 1075 aaKnown RBP24.53■■□□□ 1.52
SRM-201ENST00000376957 CDK5RAP3Q96JB5 506 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 NFKBIZQ9BYH8 718 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 POLR3FQ9H1D9 316 aaPredicted RBP24.53■■□□□ 1.52
SRM-201ENST00000376957 AGPAT5Q9NUQ2 364 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 DDX19AQ9NUU7 478 aaKnown RBP24.53■■□□□ 1.52
SRM-201ENST00000376957 MRPL42Q9Y6G3 142 aaKnown RBP24.53■■□□□ 1.52
SRM-201ENST00000376957 CDH23Q9H251 3354 aa24.53■■□□□ 1.52
SRM-201ENST00000376957 CARNS1A5YM72 827 aa24.52■■□□□ 1.52
SRM-201ENST00000376957 PTENP60484 403 aa24.52■■□□□ 1.52
SRM-201ENST00000376957 MAEAQ7L5Y9 396 aa24.52■■□□□ 1.52
SRM-201ENST00000376957 ZBTB8OSQ8IWT0 167 aa24.52■■□□□ 1.52
SRM-201ENST00000376957 AK8Q96MA6 479 aa24.52■■□□□ 1.52
SRM-201ENST00000376957 MRPL9Q9BYD2 267 aaKnown RBP24.52■■□□□ 1.52
SRM-201ENST00000376957 COG5Q9UP83 839 aa24.52■■□□□ 1.52
SRM-201ENST00000376957 COL4A4P53420 1690 aaPredicted RBP24.52■■□□□ 1.52
SRM-201ENST00000376957 A0A087WWV3 80 aa24.51■■□□□ 1.51
SRM-201ENST00000376957 VWA3AA6NCI4 1184 aa24.51■■□□□ 1.51
SRM-201ENST00000376957 FGFR1P11362 822 aa24.51■■□□□ 1.51
SRM-201ENST00000376957 LAG3P18627 525 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms