RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 CHAMP1Q96JM3 812 aa25.13■■□□□ 1.61
YIF1A-202ENST00000376899 RUSC1Q9BVN2 902 aa25.13■■□□□ 1.61
YIF1A-202ENST00000376899 INO80BQ9C086 356 aaPredicted RBP25.13■■□□□ 1.61
YIF1A-202ENST00000376899 CCDC39Q9UFE4 941 aa25.13■■□□□ 1.61
YIF1A-202ENST00000376899 TTC3P53804 2025 aa25.13■■□□□ 1.61
YIF1A-202ENST00000376899 GUCY2CP25092 1073 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 NFX1Q12986 1120 aaKnown RBP25.12■■□□□ 1.61
YIF1A-202ENST00000376899 TFDP1Q14186 410 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.12■■□□□ 1.611e-6■■□□□ 13.3
YIF1A-202ENST00000376899 MAEAQ7L5Y9 396 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 SRGAP1Q7Z6B7 1085 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 RNF149Q8NC42 400 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 RASSF8Q8NHQ8 419 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 TIPINQ9BVW5 301 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 KCND2Q9NZV8 630 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 STK17AQ9UEE5 414 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 PCDHA7Q9UN72 937 aa25.12■■□□□ 1.61
YIF1A-202ENST00000376899 MYH11P35749 1972 aa25.11■■□□□ 1.61
YIF1A-202ENST00000376899 PTENP60484 403 aa25.11■■□□□ 1.61
YIF1A-202ENST00000376899 DSC3Q14574 896 aa25.11■■□□□ 1.61
YIF1A-202ENST00000376899 FAM102BQ5T8I3 360 aa25.11■■□□□ 1.61
YIF1A-202ENST00000376899 SHC4Q6S5L8 630 aa25.11■■□□□ 1.61
YIF1A-202ENST00000376899 RTN4RL1Q86UN2 441 aaPredicted RBP25.11■■□□□ 1.61
YIF1A-202ENST00000376899 LEO1Q8WVC0 666 aaPredicted RBP25.11■■□□□ 1.61
YIF1A-202ENST00000376899 RAD54LQ92698 747 aa25.11■■□□□ 1.61
YIF1A-202ENST00000376899 KIFAP3Q92845 792 aa25.11■■□□□ 1.61
YIF1A-202ENST00000376899 NFKBIZQ9BYH8 718 aa25.11■■□□□ 1.61
YIF1A-202ENST00000376899 TSPYL2Q9H2G4 693 aaPredicted RBP25.11■■□□□ 1.61
YIF1A-202ENST00000376899 GRXCR1A8MXD5 290 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 ENPP3O14638 875 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 MGEA5O60502 916 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 AMHP03971 560 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 SRGAP2CP0DJJ0 459 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 SFPQP23246 707 aaKnown RBP eCLIP25.1■■□□□ 1.61
YIF1A-202ENST00000376899 PHKA2P46019 1235 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 ME1P48163 572 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 FXR1P51114 621 aaKnown RBP eCLIP25.1■■□□□ 1.61
YIF1A-202ENST00000376899 HERC6Q8IVU3 1022 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 LARP4BQ92615 738 aaKnown RBP25.1■■□□□ 1.61
YIF1A-202ENST00000376899 SPATA32Q96LK8 384 aa25.1■■□□□ 1.61
YIF1A-202ENST00000376899 A0A087X0B3 334 aa25.09■■□□□ 1.61
YIF1A-202ENST00000376899 CSDE1O75534 798 aaKnown RBP25.09■■□□□ 1.61
YIF1A-202ENST00000376899 NCLP19338 710 aaKnown RBP25.09■■□□□ 1.61
YIF1A-202ENST00000376899 MAPK7Q13164 816 aa25.09■■□□□ 1.61
YIF1A-202ENST00000376899 NAALADL2Q58DX5 795 aa25.09■■□□□ 1.61
YIF1A-202ENST00000376899 CCDC73Q6ZRK6 1079 aa25.09■■□□□ 1.61
YIF1A-202ENST00000376899 DAW1Q8N136 415 aa25.09■■□□□ 1.61
YIF1A-202ENST00000376899 BSNDQ8WZ55 320 aa25.09■■□□□ 1.61
YIF1A-202ENST00000376899 MINDY3Q9H8M7 445 aa25.09■■□□□ 1.61
YIF1A-202ENST00000376899 HIP1RO75146 1068 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 SSBP05455 408 aaKnown RBP eCLIP25.08■■□□□ 1.61
YIF1A-202ENST00000376899 FGFR4P22455 802 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 NAMPTP43490 491 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 MCM6Q14566 821 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 PPP2R5AQ15172 486 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 ARSHQ5FYA8 562 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 RRAGBQ5VZM2 374 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 CDCA2Q69YH5 1023 aaPredicted RBP25.08■■□□□ 1.61
YIF1A-202ENST00000376899 TOP1MTQ969P6 601 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 LRCH3Q96II8 777 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 SCAND2PQ9GZW5 306 aaPredicted RBP25.08■■□□□ 1.61
YIF1A-202ENST00000376899 RGS18Q9NS28 235 aa25.08■■□□□ 1.61
YIF1A-202ENST00000376899 GJB5O95377 273 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 PCBP1Q15365 356 aaKnown RBP eCLIP25.07■■□□□ 1.6
YIF1A-202ENST00000376899 RESP18Q5W5W9 173 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 MYOCDQ8IZQ8 938 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 DRC1Q96MC2 740 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 PBX4Q9BYU1 374 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 C17orf75Q9HAS0 396 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 TSHZ2Q9NRE2 1034 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 C1orf112Q9NSG2 853 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 PCDHA11Q9Y5I1 949 aa25.07■■□□□ 1.6
YIF1A-202ENST00000376899 MBTD1Q05BQ5 628 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 RAB30Q15771 203 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 GPR153Q6NV75 609 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 CATSPER4Q7RTX7 472 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 GPBP1Q86WP2 473 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 CRIPAKQ8N1N5 446 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 ADAM2Q99965 735 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 CHST12Q9NRB3 414 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 AGPAT5Q9NUQ2 364 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 LAMA3Q16787 3333 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 COL4A6Q14031 1691 aa25.06■■□□□ 1.6
YIF1A-202ENST00000376899 DENND3A2RUS2 1198 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 LRRIQ4A6NIV6 560 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 C9IYK1 514 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 PBX2P40425 430 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 STAT6P42226 847 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 RABGGTBP53611 331 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 E2F4Q16254 413 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 TMCO2Q7Z6W1 182 aaPredicted RBP25.05■■□□□ 1.6
YIF1A-202ENST00000376899 IFT74Q96LB3 600 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 POLD4Q9HCU8 107 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 ODF2LQ9ULJ1 636 aa25.05■■□□□ 1.6
YIF1A-202ENST00000376899 RBM19Q9Y4C8 960 aaKnown RBP25.05■■□□□ 1.6
YIF1A-202ENST00000376899 DNAJB2P25686 324 aa25.04■■□□□ 1.6
YIF1A-202ENST00000376899 SARSP49591 514 aaKnown RBP25.04■■□□□ 1.6
YIF1A-202ENST00000376899 HTRA4P83105 476 aaPredicted RBP25.04■■□□□ 1.6
YIF1A-202ENST00000376899 AMHR2Q16671 573 aa25.04■■□□□ 1.6
YIF1A-202ENST00000376899 ADALQ6DHV7 355 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms