RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 FLT3P36888 993 aa27.46■■□□□ 1.99
C9orf40-201ENST00000376854 PPP2R5AQ15172 486 aa27.46■■□□□ 1.99
C9orf40-201ENST00000376854 PTGISQ16647 500 aa27.46■■□□□ 1.99
C9orf40-201ENST00000376854 CCDC174Q6PII3 467 aa27.46■■□□□ 1.99
C9orf40-201ENST00000376854 APEX2Q9UBZ4 518 aa27.46■■□□□ 1.99
C9orf40-201ENST00000376854 IGSF9BQ9UPX0 1349 aa27.46■■□□□ 1.99
C9orf40-201ENST00000376854 CCDC172P0C7W6 258 aa27.45■■□□□ 1.99
C9orf40-201ENST00000376854 HPDP32754 393 aaPredicted RBP27.45■■□□□ 1.99
C9orf40-201ENST00000376854 MYL7Q01449 175 aa27.45■■□□□ 1.99
C9orf40-201ENST00000376854 ZNF844Q08AG5 666 aa27.45■■□□□ 1.99
C9orf40-201ENST00000376854 UBLCP1Q8WVY7 318 aaPredicted RBP27.45■■□□□ 1.99
C9orf40-201ENST00000376854 CELF4Q9BZC1 486 aaKnown RBP27.45■■□□□ 1.99
C9orf40-201ENST00000376854 ODF2LQ9ULJ1 636 aa27.45■■□□□ 1.99
C9orf40-201ENST00000376854 TTC7AQ9ULT0 858 aaPredicted RBP27.45■■□□□ 1.99
C9orf40-201ENST00000376854 SYNPO2Q9UMS6 1093 aa27.45■■□□□ 1.99
C9orf40-201ENST00000376854 TCP10L2B9ZVM9 353 aa27.45■■□□□ 1.98
C9orf40-201ENST00000376854 LIG3P49916 1009 aa27.45■■□□□ 1.98
C9orf40-201ENST00000376854 PPATQ06203 517 aa27.45■■□□□ 1.98
C9orf40-201ENST00000376854 UTP11Q9Y3A2 253 aaKnown RBP27.45■■□□□ 1.98
C9orf40-201ENST00000376854 DDX3YO15523 660 aaKnown RBP27.44■■□□□ 1.98
C9orf40-201ENST00000376854 MUTP22033 750 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 MTMR3Q13615 1198 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 CEP55Q53EZ4 464 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 FMNL3Q8IVF7 1028 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 ACER1Q8TDN7 264 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 ZNF577Q9BSK1 485 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 UNC45AQ9H3U1 944 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 ARHGEF10LQ9HCE6 1279 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 SEPT11Q9NVA2 429 aaKnown RBP27.44■■□□□ 1.98
C9orf40-201ENST00000376854 KCND2Q9NZV8 630 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 CLRN2A0PK11 232 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 VGLL3A8MV65 326 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 TNFAIP3P21580 790 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 ARHGAP44Q17R89 818 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 TEX2Q8IWB9 1127 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 SEC14L1Q92503 715 aa27.44■■□□□ 1.98
C9orf40-201ENST00000376854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.44■■□□□ 1.98
C9orf40-201ENST00000376854 FAM170AA1A519 330 aa27.43■■□□□ 1.98
C9orf40-201ENST00000376854 ERLIN2O94905 339 aa27.43■■□□□ 1.98
C9orf40-201ENST00000376854 NAA35Q5VZE5 725 aa27.43■■□□□ 1.98
C9orf40-201ENST00000376854 ARFGAP2Q8N6H7 521 aa27.43■■□□□ 1.98
C9orf40-201ENST00000376854 ARHGEF26Q96DR7 871 aa27.43■■□□□ 1.98
C9orf40-201ENST00000376854 DIS3Q9Y2L1 958 aaKnown RBP27.43■■□□□ 1.98
C9orf40-201ENST00000376854 PPIP5K2O43314 1243 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 EXOC3O60645 756 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 DCAF12L1Q5VU92 463 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 CC2D2BQ6DHV5 1058 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 RUFY4Q6ZNE9 571 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 SYCP3Q8IZU3 236 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 WDR11Q9BZH6 1224 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 THAP2Q9H0W7 228 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 DPH5Q9H2P9 285 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 FAM114A2Q9NRY5 505 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 TAS2R14Q9NYV8 317 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.42■■□□□ 1.98
C9orf40-201ENST00000376854 INPP5BP32019 993 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 POU5F1Q01860 360 aaKnown RBP27.42■■□□□ 1.98
C9orf40-201ENST00000376854 BFSP1Q12934 665 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 PRPF4BQ13523 1007 aaKnown RBP27.42■■□□□ 1.98
C9orf40-201ENST00000376854 PLS1Q14651 629 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 TMC3Q7Z5M5 1100 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 SPATS2Q86XZ4 545 aaKnown RBP27.42■■□□□ 1.98
C9orf40-201ENST00000376854 RDH13Q8NBN7 331 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 ZNF473Q8WTR7 871 aaKnown RBP27.42■■□□□ 1.98
C9orf40-201ENST00000376854 CNKSR1Q969H4 720 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 EHMT1Q9H9B1 1298 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 EFCC1Q9HA90 598 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 NR2E1Q9Y466 385 aa27.42■■□□□ 1.98
C9orf40-201ENST00000376854 MYO1FO00160 1098 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 VIL1P09327 827 aaKnown RBP27.41■■□□□ 1.98
C9orf40-201ENST00000376854 ARP10275 920 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 SEC24CP53992 1094 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 BIRC3Q13489 604 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 PHLDB3Q6NSJ2 640 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 BANK1Q8NDB2 785 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 C21orf2O43822 256 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 NLRP14Q86W24 1093 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 HOOK2Q96ED9 719 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 LXNQ9BS40 222 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 GOPCQ9HD26 462 aa27.41■■□□□ 1.98
C9orf40-201ENST00000376854 ATXN2Q99700 1313 aaKnown RBP27.4■■□□□ 1.98
C9orf40-201ENST00000376854 ARHGEF35A5YM69 484 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 LRRN2O75325 713 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 GUCY2CP25092 1073 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 KIF22Q14807 665 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 PALB2Q86YC2 1186 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 SLC9A9Q8IVB4 645 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 CCT8L2Q96SF2 557 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 TRIM51Q9BSJ1 452 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 TEKT3Q9BXF9 490 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 CARD9Q9H257 536 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 BCCIPQ9P287 314 aaKnown RBP eCLIP27.4■■□□□ 1.98
C9orf40-201ENST00000376854 TMX2Q9Y320 296 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 DAAM1Q9Y4D1 1078 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 ANKRD62A6NC57 917 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 FOXN3O00409 490 aaPredicted RBP27.4■■□□□ 1.98
C9orf40-201ENST00000376854 HIP1RO75146 1068 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 DHX9Q08211 1270 aaKnown RBP27.4■■□□□ 1.98
C9orf40-201ENST00000376854 MYCBPAPQ8TBZ2 947 aa27.4■■□□□ 1.98
C9orf40-201ENST00000376854 HERC5Q9UII4 1024 aaKnown RBP27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms