RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ZHX1Q9UKY1 873 aaPredicted RBP22.03■■□□□ 1.12
VSX1-202ENST00000376709 F8VZ95 297 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 NR3C2P08235 984 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 OAZ1P54368 228 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 GPS2Q13227 327 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 PLA2G4FQ68DD2 849 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 HAUS6Q7Z4H7 955 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 VSIG10LQ86VR7 867 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 REPS2Q8NFH8 660 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 GPRC5CQ9NQ84 441 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 RLFQ13129 1914 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 TISP43B9A030 160 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 C19orf81C9J6K1 198 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 EIF3JO75822 258 aaKnown RBP22.02■■□□□ 1.12
VSX1-202ENST00000376709 DSG3P32926 999 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 MATR3P43243 847 aaKnown RBP eCLIP22.02■■□□□ 1.12
VSX1-202ENST00000376709 DNA2P51530 1060 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 PEX3P56589 373 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 FAM102BQ5T8I3 360 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 INTS8Q75QN2 995 aaKnown RBP22.02■■□□□ 1.12
VSX1-202ENST00000376709 STK33Q9BYT3 514 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 INTS2Q9H0H0 1204 aaKnown RBP22.02■■□□□ 1.12
VSX1-202ENST00000376709 APEX2Q9UBZ4 518 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 DNAJC12Q9UKB3 198 aa22.02■■□□□ 1.12
VSX1-202ENST00000376709 BTNL10A8MVZ5 291 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 EVI5O60447 810 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 ZMYND10O75800 440 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 SOX5P35711 763 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 CASP8Q14790 479 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 SUPT20HL1Q3ZLR7 823 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 MMGT1Q8N4V1 131 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 NSUN6Q8TEA1 469 aaKnown RBP22.01■■□□□ 1.11
VSX1-202ENST00000376709 GPRASP2Q96D09 838 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 SMARCAL1Q9NZC9 954 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 EHD2Q9NZN4 543 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 ZNF214Q9UL59 606 aaPredicted RBP22.01■■□□□ 1.11
VSX1-202ENST00000376709 SBF1O95248 1867 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 POLR2AP24928 1970 aaKnown RBP22.01■■□□□ 1.11
VSX1-202ENST00000376709 KIAA1217Q5T5P2 1943 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 SLC16A4O15374 487 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 NPEPPSP55786 919 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 DRAP1Q14919 205 aaPredicted RBP22.01■■□□□ 1.11
VSX1-202ENST00000376709 CFAP221Q4G0U5 840 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.01■■□□□ 1.11
VSX1-202ENST00000376709 CBWD1Q9BRT8 395 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 MOV10L1Q9BXT6 1211 aaKnown RBP22.01■■□□□ 1.11
VSX1-202ENST00000376709 ANKEF1Q9NU02 776 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 PCDHA10Q9Y5I2 948 aa22.01■■□□□ 1.11
VSX1-202ENST00000376709 GRID2IPA4D2P6 1211 aa22■■□□□ 1.11
VSX1-202ENST00000376709 NOP2P46087 812 aaKnown RBP22■■□□□ 1.11
VSX1-202ENST00000376709 GTF2BQ00403 316 aa22■■□□□ 1.11
VSX1-202ENST00000376709 IFI16Q16666 785 aaKnown RBP22■■□□□ 1.11
VSX1-202ENST00000376709 NOL9Q5SY16 702 aaKnown RBP22■■□□□ 1.11
VSX1-202ENST00000376709 MEI1Q5TIA1 1274 aa22■■□□□ 1.11
VSX1-202ENST00000376709 ZNF746Q6NUN9 644 aaPredicted RBP22■■□□□ 1.11
VSX1-202ENST00000376709 RDM1Q8NG50 284 aa22■■□□□ 1.11
VSX1-202ENST00000376709 ZBTB9Q96C00 473 aa22■■□□□ 1.11
VSX1-202ENST00000376709 IWS1Q96ST2 819 aa22■■□□□ 1.11
VSX1-202ENST00000376709 ZCCHC17Q9NP64 241 aaKnown RBP22■■□□□ 1.11
VSX1-202ENST00000376709 TMOD4Q9NZQ9 345 aa22■■□□□ 1.11
VSX1-202ENST00000376709 MAFGO15525 162 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 USP2O75604 605 aaPredicted RBP21.99■■□□□ 1.11
VSX1-202ENST00000376709 CETN1Q12798 172 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 TMEM132BQ14DG7 1078 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 TEX13BQ9BXU2 312 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 ST6GALNAC4Q9H4F1 302 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 PDE11AQ9HCR9 933 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 RNF14Q9UBS8 474 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 ADAMTS5Q9UNA0 930 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 PACSIN2Q9UNF0 486 aaPredicted RBP21.99■■□□□ 1.11
VSX1-202ENST00000376709 AFG3L2Q9Y4W6 797 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 H3BQF6 201 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 VAMP7P51809 220 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 DLG4P78352 724 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 CATSPERGQ6ZRH7 1159 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 DNAAF5Q86Y56 855 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 FMNL3Q8IVF7 1028 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 XXYLT1Q8NBI6 393 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 SLC17A8Q8NDX2 589 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 MS4A14Q96JA4 679 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 INPP4AQ96PE3 977 aaPredicted RBP21.99■■□□□ 1.11
VSX1-202ENST00000376709 HSPBP1Q9NZL4 362 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 RNF181Q9P0P0 153 aa21.99■■□□□ 1.11
VSX1-202ENST00000376709 CCDC169A6NNP5 214 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 CCDC172P0C7W6 258 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 TNNT3P45378 269 aaPredicted RBP21.98■■□□□ 1.11
VSX1-202ENST00000376709 SMTNP53814 917 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 NCKAP1LP55160 1127 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 ANO5Q75V66 913 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 C12orf56Q8IXR9 622 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 U2AF1L4Q8WU68 220 aaKnown RBP21.98■■□□□ 1.11
VSX1-202ENST00000376709 LRRC1Q9BTT6 524 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 ACAD9Q9H845 621 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 EMSYQ7Z589 1322 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 WDR81Q562E7 1941 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 DDX3XO00571 662 aaKnown RBP eCLIP21.98■■□□□ 1.11
VSX1-202ENST00000376709 H2AFZP0C0S5 128 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 DMP1Q13316 513 aaPredicted RBP21.98■■□□□ 1.11
VSX1-202ENST00000376709 H2AFVQ71UI9 128 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 OTUD6AQ7L8S5 288 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms