RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 RBM5P52756 815 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRIM39-202ENST00000376659 UBXN2AP68543 259 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 PPP3CAQ08209 521 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 BFSP1Q12934 665 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 CFAP221Q4G0U5 840 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 ARHGEF19Q8IW93 802 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 ZDHHC14Q8IZN3 488 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
TRIM39-202ENST00000376659 IPO7O95373 1038 aaKnown RBP10.46□□□□□ -0.74
TRIM39-202ENST00000376659 TMEM253P0C7T8 217 aa10.46□□□□□ -0.74
TRIM39-202ENST00000376659 TDRD12Q587J7 1177 aaKnown RBP10.46□□□□□ -0.74
TRIM39-202ENST00000376659 ALKBH5Q6P6C2 394 aaKnown RBP10.46□□□□□ -0.74
TRIM39-202ENST00000376659 ARL8AQ96BM9 186 aa10.46□□□□□ -0.74
TRIM39-202ENST00000376659 GDAP1L1Q96MZ0 367 aa10.46□□□□□ -0.74
TRIM39-202ENST00000376659 ZNF577Q9BSK1 485 aa10.46□□□□□ -0.74
TRIM39-202ENST00000376659 ISCUQ9H1K1 167 aa10.46□□□□□ -0.74
TRIM39-202ENST00000376659 OSGEPQ9NPF4 335 aa10.46□□□□□ -0.74
TRIM39-202ENST00000376659 APEX2Q9UBZ4 518 aa10.46□□□□□ -0.74
TRIM39-202ENST00000376659 ZHX2Q9Y6X8 837 aa10.46□□□□□ -0.74
TRIM39-202ENST00000376659 TP73O15350 636 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 GRIN3BO60391 1043 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 RGS20O76081 388 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 ZSCAN26Q16670 478 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 NACC1Q96RE7 527 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 KIAA1683Q9H0B3 1180 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 MRPL11Q9Y3B7 192 aaKnown RBP10.45□□□□□ -0.74
TRIM39-202ENST00000376659 NR2E1Q9Y466 385 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 TELO2Q9Y4R8 837 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 CFBP00751 764 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 ADRB2P07550 413 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 PGM5Q15124 567 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 NBPF9Q3BBW0 867 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 ALS2CLQ60I27 953 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 ZNF772Q68DY9 489 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-202ENST00000376659 TPH2Q8IWU9 490 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 SYTL5Q8TDW5 730 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-202ENST00000376659 DDX1Q92499 740 aaKnown RBP10.45□□□□□ -0.74
TRIM39-202ENST00000376659 FBXL18Q96ME1 805 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 CEP89Q96ST8 783 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 TRIM49P0CI25 452 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 TRIM49CP0CI26 452 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 VCAM1P19320 739 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 PLS1Q14651 629 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 SIX1Q15475 284 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-202ENST00000376659 TAS1R3Q7RTX0 852 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 PBKQ96KB5 322 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 HINFPQ9BQA5 517 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 PAGR1Q9BTK6 254 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-202ENST00000376659 MAP3K20Q9NYL2 800 aaKnown RBP10.45□□□□□ -0.74
TRIM39-202ENST00000376659 PPP1R9AQ9ULJ8 1098 aa10.45□□□□□ -0.74
TRIM39-202ENST00000376659 NOC2LQ9Y3T9 749 aaKnown RBP10.45□□□□□ -0.74
TRIM39-202ENST00000376659 GAS7O60861 476 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ALAS1P13196 640 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ITGA4P13612 1032 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 FERP16591 822 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 RFX1P22670 979 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 GALCP54803 685 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 CLDN10P78369 228 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 DCAF17Q5H9S7 520 aaPredicted RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 RTKN2Q8IZC4 609 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 SAMD3Q8N6K7 520 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 TEKT3Q9BXF9 490 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ZDHHC18Q9NUE0 388 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ZNF112Q9UJU3 913 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 COQ4Q9Y3A0 265 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 PDCD11Q14690 1871 aaKnown RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 POLR2AP24928 1970 aaKnown RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ESYT3A0FGR9 886 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 RAD17O75943 681 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 HEXIM1O94992 359 aaKnown RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 RPL13P26373 211 aaKnown RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 FLT3P36888 993 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 SF3B2Q13435 895 aaKnown RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 DRAP1Q14919 205 aaPredicted RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 C8orf74Q6P047 294 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 C15orf39Q6ZRI6 1047 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 CAGE1Q8TC20 777 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 CHURC1Q8WUH1 139 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 SLC20A1Q8WUM9 679 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ERVK-5Q9HDB9 667 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ZNF219Q9P2Y4 722 aaPredicted RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 RALGAPA2Q2PPJ7 1873 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ADGRA3Q8IWK6 1321 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 BACH1O14867 736 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 WDR46O15213 610 aaKnown RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 TBCAO75347 108 aaKnown RBP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 PLS3P13797 630 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 ENPEPQ07075 957 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 SND1Q7KZF4 910 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRIM39-202ENST00000376659 MYCT1Q8N699 235 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 AFAP1L1Q8TED9 768 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 KREMEN1Q96MU8 473 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 PCDHB18PQ96TA0 734 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.44□□□□□ -0.744e-7■■□□□ 14.2
TRIM39-202ENST00000376659 CALCOCO1Q9P1Z2 691 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 NFU1Q9UMS0 254 aa10.44□□□□□ -0.74
TRIM39-202ENST00000376659 CCDC66A2RUB6 948 aa10.43□□□□□ -0.74
TRIM39-202ENST00000376659 TMEM150BA6NC51 233 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms