RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
MSH5-203ENST00000375750 ASTN2O75129 1339 aaPredicted RBP16.48■□□□□ 0.23
MSH5-203ENST00000375750 BUB1BO60566 1050 aaPredicted RBP16.48■□□□□ 0.23
MSH5-203ENST00000375750 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 MYCBPQ99417 103 aaPredicted RBP16.48■□□□□ 0.23
MSH5-203ENST00000375750 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 NT5C3AQ9H0P0 336 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 GCNT4Q9P109 453 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 PNMA2Q9UL42 364 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 GOLGA6L7A0A1B0GV03 622 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 CAND2O75155 1236 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 H2AFZP0C0S5 128 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 XRCC5P13010 732 aaKnown RBP16.48■□□□□ 0.23
MSH5-203ENST00000375750 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
MSH5-203ENST00000375750 KNOP1Q1ED39 458 aaKnown RBP16.48■□□□□ 0.23
MSH5-203ENST00000375750 H2AFVQ71UI9 128 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 LRRC45Q96CN5 670 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 GOPCQ9HD26 462 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 TAS2R14Q9NYV8 317 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 PGAP2Q9UHJ9 254 aa16.48■□□□□ 0.23
MSH5-203ENST00000375750 TLDC2A0PJX2 215 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 F8VZ95 297 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 GMPSP49915 693 aaPredicted RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 MRPL12P52815 198 aaKnown RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 RASA3Q14644 834 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 COG2Q14746 738 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 HYIQ5T013 277 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 FKBP1CQ5VVH2 108 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 ARHGAP27Q6ZUM4 889 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 CCDC91Q7Z6B0 441 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 FAM83AQ86UY5 434 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 PALB2Q86YC2 1186 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 MICALL2Q8IY33 904 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 GEMIN8Q9NWZ8 242 aaKnown RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 ZBTB21Q9ULJ3 1066 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 PCDHA1Q9Y5I3 950 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 ATXN2Q99700 1313 aaKnown RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 BHMG1C9JSJ3 638 aaPredicted RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 ZBTB39O15060 712 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 RASSF9O75901 435 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 BMP3P12645 472 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 TBC1D10BQ4KMP7 808 aaPredicted RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 YTHDF3Q7Z739 585 aaKnown RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 ZC3H3Q8IXZ2 948 aaKnown RBP16.47■□□□□ 0.23
MSH5-203ENST00000375750 OLIG1Q8TAK6 271 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 CYP2W1Q8TAV3 490 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 ATP8B4Q8TF62 1192 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 ARHGEF26Q96DR7 871 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 RUSC1Q9BVN2 902 aa16.47■□□□□ 0.23
MSH5-203ENST00000375750 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
MSH5-203ENST00000375750 SPATA31C1P0DKV0 1188 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 MAP2K2P36507 400 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 ZC2HC1CQ53FD0 456 aaPredicted RBP16.46■□□□□ 0.23
MSH5-203ENST00000375750 SPATS2Q86XZ4 545 aaKnown RBP16.46■□□□□ 0.23
MSH5-203ENST00000375750 SLC35G2Q8TBE7 412 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 SLC35C1Q96A29 364 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 GMCL1Q96IK5 515 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 SEPT11Q9NVA2 429 aaKnown RBP16.46■□□□□ 0.23
MSH5-203ENST00000375750 ASTN1O14525 1302 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 KDM3AQ9Y4C1 1321 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 BTNL10A8MVZ5 291 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 FLOT1O75955 427 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 GCNT3O95395 438 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 NR3C1P04150 777 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 IFFO1Q0D2I5 559 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 FAM228AQ86W67 206 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 ANO3Q9BYT9 981 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 GLIS2Q9BZE0 524 aaPredicted RBP16.46■□□□□ 0.23
MSH5-203ENST00000375750 KCNMB3Q9NPA1 279 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 RGL1Q9NZL6 768 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 TMOD4Q9NZQ9 345 aa16.46■□□□□ 0.23
MSH5-203ENST00000375750 CNOT7Q9UIV1 285 aaKnown RBP16.46■□□□□ 0.23
MSH5-203ENST00000375750 FRMD3A2A2Y4 597 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 EVI5O60447 810 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 ZNF280AP59817 542 aaPredicted RBP16.45■□□□□ 0.22
MSH5-203ENST00000375750 LLGL1Q15334 1064 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 USH1GQ495M9 461 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 ANKRD20A8PQ5CZ79 823 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 FOXR2Q6PJQ5 311 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 ARFGAP2Q8N6H7 521 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 C1orf131Q8NDD1 294 aaKnown RBP16.45■□□□□ 0.22
MSH5-203ENST00000375750 PIGOQ8TEQ8 1089 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 BHMT2Q9H2M3 363 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.45■□□□□ 0.229e-7■■■■■ 47
MSH5-203ENST00000375750 NENFQ9UMX5 172 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 SNX24Q9Y343 169 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 SPDYE3A6NKU9 549 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 LRRN2O75325 713 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 NMT1P30419 496 aaKnown RBP16.45■□□□□ 0.22
MSH5-203ENST00000375750 USP8P40818 1118 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 SMTNP53814 917 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 GSCP56915 257 aaPredicted RBP16.45■□□□□ 0.22
MSH5-203ENST00000375750 JAM2P57087 298 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 CPLX4Q7Z7G2 160 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 SLFN11Q7Z7L1 901 aa16.45■□□□□ 0.22
MSH5-203ENST00000375750 RASGEF1CQ8N431 466 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms