RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 CABP7Q86V35 215 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 EXOC8Q8IYI6 725 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 ZNF710Q8N1W2 664 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 RNF149Q8NC42 400 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 TCP11Q8WWU5 503 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 CCDC43Q96MW1 224 aaKnown RBP17.76■□□□□ 0.43
C11orf88-202ENST00000375618 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 RAD9AQ99638 391 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 ZBED2Q9BTP6 218 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 RUSC1Q9BVN2 902 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 FTHL17Q9BXU8 183 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 CSRNP2Q9H175 543 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 RC3H2Q9HBD1 1191 aaKnown RBP17.76■□□□□ 0.43
C11orf88-202ENST00000375618 RGS18Q9NS28 235 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 STK24Q9Y6E0 443 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 TTC3P53804 2025 aa17.76■□□□□ 0.43
C11orf88-202ENST00000375618 SLC34A2O95436 690 aa17.75■□□□□ 0.43
C11orf88-202ENST00000375618 EYA4O95677 639 aa17.75■□□□□ 0.43
C11orf88-202ENST00000375618 SLC39A14Q15043 492 aa17.75■□□□□ 0.43
C11orf88-202ENST00000375618 PPP2R2DQ66LE6 453 aa17.75■□□□□ 0.43
C11orf88-202ENST00000375618 SP7Q8TDD2 431 aaPredicted RBP17.75■□□□□ 0.43
C11orf88-202ENST00000375618 EPSTI1Q96J88 318 aa17.75■□□□□ 0.43
C11orf88-202ENST00000375618 CERS4Q9HA82 394 aa17.75■□□□□ 0.43
C11orf88-202ENST00000375618 SLC28A3Q9HAS3 691 aa17.75■□□□□ 0.43
C11orf88-202ENST00000375618 CHD7Q9P2D1 2997 aa17.74■□□□□ 0.43
C11orf88-202ENST00000375618 LINC01553A4QN01 128 aa17.74■□□□□ 0.43
C11orf88-202ENST00000375618 IBSPP21815 317 aaPredicted RBP17.74■□□□□ 0.43
C11orf88-202ENST00000375618 LONP1P36776 959 aaKnown RBP17.74■□□□□ 0.43
C11orf88-202ENST00000375618 CDC42EP1Q00587 391 aa17.74■□□□□ 0.43
C11orf88-202ENST00000375618 KARSQ15046 597 aaKnown RBP17.74■□□□□ 0.43
C11orf88-202ENST00000375618 DAW1Q8N136 415 aa17.74■□□□□ 0.43
C11orf88-202ENST00000375618 LINC00301Q8NCQ3 95 aa17.74■□□□□ 0.43
C11orf88-202ENST00000375618 AK8Q96MA6 479 aa17.74■□□□□ 0.43
C11orf88-202ENST00000375618 CDX2Q99626 313 aaPredicted RBP17.74■□□□□ 0.43
C11orf88-202ENST00000375618 DNM3Q9UQ16 869 aa17.74■□□□□ 0.43
C11orf88-202ENST00000375618 SRPRBQ9Y5M8 271 aaKnown RBP17.74■□□□□ 0.43
C11orf88-202ENST00000375618 MORC2Q9Y6X9 1032 aaPredicted RBP17.74■□□□□ 0.43
C11orf88-202ENST00000375618 DENND3A2RUS2 1198 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 RFXAPO00287 272 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 ASAP2O43150 1006 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 DGKIO75912 1065 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 BRD1O95696 1058 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 LINC00271P0C7V0 271 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 SARSP49591 514 aaKnown RBP17.73■□□□□ 0.43
C11orf88-202ENST00000375618 PTENP60484 403 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 FAM189BP81408 668 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 MAPK7Q13164 816 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 MXD4Q14582 209 aaPredicted RBP17.73■□□□□ 0.43
C11orf88-202ENST00000375618 ODR4Q5SWX8 454 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 FAM102BQ5T8I3 360 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 RINT1Q6NUQ1 792 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 C1orf186Q6ZWK4 172 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 IFNLR1Q8IU57 520 aaPredicted RBP17.73■□□□□ 0.43
C11orf88-202ENST00000375618 NPAS4Q8IUM7 802 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 MCPH1Q8NEM0 835 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 MYLIPQ8WY64 445 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 ZNF689Q96CS4 500 aaPredicted RBP17.73■□□□□ 0.43
C11orf88-202ENST00000375618 PRDM12Q9H4Q4 367 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 BLOC1S4Q9NUP1 217 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 RNF19AQ9NV58 838 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
C11orf88-202ENST00000375618 INSL6Q9Y581 213 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 CDH23Q9H251 3354 aa17.73■□□□□ 0.43
C11orf88-202ENST00000375618 ATF7P17544 494 aaPredicted RBP17.72■□□□□ 0.43
C11orf88-202ENST00000375618 PLCG1P19174 1290 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 HOXA11P31270 313 aaPredicted RBP17.72■□□□□ 0.43
C11orf88-202ENST00000375618 SLC12A3P55017 1021 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 MBTD1Q05BQ5 628 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 ADGRE1Q14246 886 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 AMHR2Q16671 573 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 SLC24A5Q71RS6 500 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 CATSPER4Q7RTX7 472 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 SRGAP1Q7Z6B7 1085 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 SYMPKQ92797 1274 aaKnown RBP17.72■□□□□ 0.43
C11orf88-202ENST00000375618 YME1L1Q96TA2 773 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 CCSER1Q9C0I3 900 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 ADGRA3Q8IWK6 1321 aa17.72■□□□□ 0.43
C11orf88-202ENST00000375618 A0A087X0B3 334 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 NPHP3-ACAD11A0A0J9YXS1 232 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 EDN1P05305 212 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 PLA2G4BP0C869 781 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 FGFR1P11362 822 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 SFPQP23246 707 aaKnown RBP eCLIP17.71■□□□□ 0.43
C11orf88-202ENST00000375618 UBA7P41226 1012 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 PHKA2P46019 1235 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 DNM1Q05193 864 aaKnown RBP17.71■□□□□ 0.43
C11orf88-202ENST00000375618 POU5F1BQ06416 359 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 STK38Q15208 465 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 ECHDC2Q86YB7 292 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 SYT2Q8N9I0 419 aaPredicted RBP17.71■□□□□ 0.43
C11orf88-202ENST00000375618 ZNF396Q96N95 335 aaPredicted RBP17.71■□□□□ 0.43
C11orf88-202ENST00000375618 C17orf80Q9BSJ5 609 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 KIFC3Q9BVG8 833 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 C1orf112Q9NSG2 853 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 AGPAT5Q9NUQ2 364 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 HCSTQ9UBK5 93 aa17.71■□□□□ 0.43
C11orf88-202ENST00000375618 PIN4Q9Y237 131 aaKnown RBP17.71■□□□□ 0.43
C11orf88-202ENST00000375618 LRRIQ4A6NIV6 560 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 TTLL13PA6NNM8 815 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 B4GALT5O43286 388 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms