RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 ABLIM3O94929 683 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 TBC1D8O95759 1140 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 HPXP02790 462 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 USP17L7P0C7H9 530 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 NCAM1P13591 858 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 HSD3B1P14060 373 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 VCAM1P19320 739 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 ITIH2P19823 946 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 NME2P22392 152 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 DEKP35659 375 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 EIF4A3P38919 411 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 NEK3P51956 506 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CTSWP56202 376 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CHAF1AQ13111 956 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 PRKG2Q13237 762 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 PDCD2Q16342 344 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 FNDC3BQ53EP0 1204 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SPECC1Q5M775 1068 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CCDC158Q5M9N0 1113 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 AHI1Q8N157 1196 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 ARL6IP6Q8N6S5 226 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SPATA5Q8NB90 893 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 NAXEQ8NCW5 288 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 ATRIPQ8WXE1 791 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CCDC74AQ96AQ1 378 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SHDQ96IW2 340 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 EAF1Q96JC9 268 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 KIF2CQ99661 725 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 EMILIN2Q9BXX0 1053 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CARS2Q9HA77 564 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 NLRC4Q9NPP4 1024 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 LUC7LQ9NQ29 371 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SLC5A4Q9NY91 659 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 STAP2Q9UGK3 403 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 PNMA8BQ9ULN7 279 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SMG5Q9UPR3 1016 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 IPPQ9Y573 584 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SUPT16HQ9Y5B9 1047 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CAPN6Q9Y6Q1 641 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 MORC2Q9Y6X9 1032 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 PRSS47A8MTI9 375 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CYP27B1O15528 508 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 RNGTTO60942 597 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 EYA4O95677 639 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SETSIPP0DME0 302 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 RXRGP48443 463 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 LINC00310P59036 64 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SSRP1Q08945 709 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SMC1AQ14683 1233 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SAFBQ15424 915 aaKnown RBP eCLIP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 PPP2R5EQ16537 467 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SLC9C1Q4G0N8 1177 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 ZBTB37Q5TC79 503 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CCDC73Q6ZRK6 1079 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SMIM5Q71RC9 77 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 RSRC2Q7L4I2 434 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 HSCBQ8IWL3 235 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 OR8H2Q8N162 312 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 TEX9Q8N6V9 391 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CELF2-AS1Q8N7Q2 184 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 KCT2Q8NC54 265 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SYTL4Q96C24 671 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 COX4I2Q96KJ9 171 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 TMEM74Q96NL1 305 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 KCNC2Q96PR1 638 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 EPB41L4BQ9H329 900 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 CXorf56Q9H5V9 222 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 NSUN3Q9H649 340 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 TCF7L1Q9HCS4 588 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 SH3GLB2Q9NR46 395 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 INTS7Q9NVH2 962 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 KLHL11Q9NVR0 708 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 RTEL1Q9NZ71 1219 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 RCAN3Q9UKA8 241 aa2.66□□□□□ -1.98
CCDC7-204ENST00000375025 DIS3Q9Y2L1 958 aaKnown RBP2.66□□□□□ -1.98
CCDC7-204ENST00000375025 VSTM5A8MXK1 200 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 J3KRW8 73 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 BRINP1O60477 761 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 PEX10O60683 326 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 SNX2O60749 519 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 TMCC2O75069 709 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 KATNA1O75449 491 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 LRIG2O94898 1065 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 RHOBTB3O94955 611 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 TMEM253P0C7T8 217 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 FOSL2P15408 326 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 MAGEA10P43363 369 aaPredicted RBP2.65□□□□□ -1.98
CCDC7-204ENST00000375025 GIPRP48546 466 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 SP3Q02447 781 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 PPP2R3AQ06190 1150 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 PABPC4Q13310 644 aaKnown RBP eCLIP2.65□□□□□ -1.98
CCDC7-204ENST00000375025 TNIP1Q15025 636 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 TOMM20Q15388 145 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 RGL3Q3MIN7 710 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.65□□□□□ -1.98
CCDC7-204ENST00000375025 GPR158Q5T848 1215 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 MEI1Q5TIA1 1274 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 LVRNQ6Q4G3 990 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 ATG14Q6ZNE5 492 aa2.65□□□□□ -1.98
CCDC7-204ENST00000375025 MAATS1Q7Z4T9 603 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms