RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 MYMKA6NI61 221 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 ACTN4O43707 911 aaKnown RBP12.58□□□□□ -0.4
HSPG2-202ENST00000374676 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-202ENST00000374676 SRGAP2CP0DJJ0 459 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 DARSP14868 501 aaKnown RBP12.58□□□□□ -0.4
HSPG2-202ENST00000374676 BMP8BP34820 402 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 PTENP60484 403 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 LONRF3Q496Y0 759 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 PLEKHG4Q58EX7 1191 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 ODR4Q5SWX8 454 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 CNNM4Q6P4Q7 775 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 TSHZ1Q6ZSZ6 1077 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 SRGAP1Q7Z6B7 1085 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 CEP57L1Q8IYX8 460 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 RNF149Q8NC42 400 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 ENGASEQ8NFI3 743 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 DNAJC19Q96DA6 116 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 IFT74Q96LB3 600 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 NTPCRQ9BSD7 190 aaKnown RBP12.58□□□□□ -0.4
HSPG2-202ENST00000374676 OSBPL7Q9BZF2 842 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 IFT122Q9HBG6 1241 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 SERTAD1Q9UHV2 236 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 GINS2Q9Y248 185 aa12.58□□□□□ -0.4
HSPG2-202ENST00000374676 NOC2LQ9Y3T9 749 aaKnown RBP12.58□□□□□ -0.4
HSPG2-202ENST00000374676 TRIOBPQ9H2D6 2365 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 NPHP3-ACAD11A0A0J9YXS1 232 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 PRPF40AO75400 957 aaKnown RBP12.57□□□□□ -0.4
HSPG2-202ENST00000374676 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 ZNF202O95125 648 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 KRT18P05783 430 aaKnown RBP12.57□□□□□ -0.4
HSPG2-202ENST00000374676 GHRP10912 638 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 NAMPTP43490 491 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 PHKA2P46019 1235 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 ZNF131P52739 623 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 EPHB4P54760 987 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 UBE2HP62256 183 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 FAM160A1Q05DH4 1040 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 RAD51AP2Q09MP3 1159 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 SNW1Q13573 536 aaKnown RBP12.57□□□□□ -0.4
HSPG2-202ENST00000374676 CAPSQ13938 189 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 PCBP1Q15365 356 aaKnown RBP eCLIP12.57□□□□□ -0.4
HSPG2-202ENST00000374676 TMEM240Q5SV17 173 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 CNKSR3Q6P9H4 555 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 PSRC1Q6PGN9 363 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-202ENST00000374676 DEFB128Q7Z7B8 93 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 FMR1NBQ8N0W7 255 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-202ENST00000374676 DBF4BQ8NFT6 615 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 TMEM40Q8WWA1 233 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 SPIRE2Q8WWL2 714 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 BSNDQ8WZ55 320 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 SEPT8Q92599 483 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 DDX12PQ92771 950 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 APBB2Q92870 758 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 NLRP4Q96MN2 994 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 SCLT1Q96NL6 688 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 PPP1R16BQ96T49 567 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 C7orf25Q9BPX7 421 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 REEP2Q9BRK0 252 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 TRIM9Q9C026 710 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 AGO3Q9H9G7 860 aaKnown RBP12.57□□□□□ -0.4
HSPG2-202ENST00000374676 PCDH10Q9P2E7 1040 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 PADI3Q9ULW8 664 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 MICAL3Q7RTP6 2002 aa12.57□□□□□ -0.4
HSPG2-202ENST00000374676 FRMD3A2A2Y4 597 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 GPR182O15218 404 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 FAM13AO94988 1023 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 FGBP02675 491 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 ACRP10323 421 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 ACTN1P12814 892 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 PLS3P13797 630 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 CD52P31358 61 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 NPTX2P47972 431 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 TPRNQ4KMQ1 711 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 CDCA2Q69YH5 1023 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-202ENST00000374676 KANK3Q6NY19 840 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 KRBA2Q6ZNG9 492 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 ZNF365Q70YC5 407 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 DYMQ7RTS9 669 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 FAM228AQ86W67 206 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 STAMQ92783 540 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 KCNN1Q92952 543 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 PAGE5Q96GU1 130 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 ZNF668Q96K58 619 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-202ENST00000374676 TIGD1Q96MW7 591 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 FTHL17Q9BXU8 183 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 IFIH1Q9BYX4 1025 aaKnown RBP12.56□□□□□ -0.4
HSPG2-202ENST00000374676 C2orf40Q9H1Z8 148 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 MINDY3Q9H8M7 445 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 PARVGQ9HBI0 331 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 ERVK-5Q9HDB9 667 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 LARSQ9P2J5 1176 aaKnown RBP12.56□□□□□ -0.4
HSPG2-202ENST00000374676 ST3GAL5Q9UNP4 418 aa12.56□□□□□ -0.4
HSPG2-202ENST00000374676 TTC3P53804 2025 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 ABHD14A-ACY1A0A1B0GW23 586 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 LRRIQ4A6NIV6 560 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 SFI1A8K8P3 1242 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 EFCAB14O75071 495 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 TBCAO75347 108 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms