RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 FAM189BP81408 668 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 MBTD1Q05BQ5 628 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 MRPL10Q7Z7H8 261 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 GDPD2Q9HCC8 539 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 DACH1Q9UI36 760 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 KAT6AQ92794 2004 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 TLR3O15455 904 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 FAM189A1O60320 539 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 MRPS6P82932 125 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 DHX58Q96C10 678 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 HDAC6Q9UBN7 1215 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 SLC16A3O15427 465 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 DNM2P50570 870 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 KMT5BQ4FZB7 885 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 TAS1R3Q7RTX0 852 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 CCDC47Q96A33 483 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 ERVK-5Q9HDB9 667 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 SEPT9Q9UHD8 586 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 RWDD2AQ9UIY3 292 aa12.34□□□□□ -0.43
CSGALNACT2-201ENST00000374466 MYL3P08590 195 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 C6orf222P0C671 652 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 HOXD13P35453 343 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CEBPZQ03701 1054 aaKnown RBP12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 KIAA0895Q8NCT3 520 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CEP63Q96MT8 703 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PANK4Q9NVE7 773 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PRMT7Q9NVM4 692 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZNF286BP0CG31 522 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 BMP6P22004 513 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 KLRC1P26715 233 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TBC1D8BQ0IIM8 1120 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CAPSQ13938 189 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 RSPH3Q86UC2 560 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SMARCE1Q969G3 411 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TNFSF13BQ9Y275 285 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PCDHA5Q9Y5H7 936 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 EFCAB14O75071 495 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 DARSP14868 501 aaKnown RBP12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 MCL1Q07820 350 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 BFSP2Q13515 415 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 RASIP1Q5U651 963 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 NECAB2Q7Z6G3 386 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 C7orf31Q8N865 590 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ENOX1Q8TC92 643 aaKnown RBP12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ASAP3Q8TDY4 903 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 GLG1Q92896 1179 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 NOC4LQ9BVI4 516 aaKnown RBP12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 RNF208Q9H0X6 261 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TSKSQ9UJT2 592 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 DERAQ9Y315 318 aa12.33□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZNF623O75123 536 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PGK1P00558 417 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 NPTX2P47972 431 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 BORCS6Q96GS4 357 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ACKR2O00590 384 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 BEX3Q00994 111 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 STX1AQ16623 288 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FOXD4L5Q5VV16 416 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 NT5DC4Q86YG4 428 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FOXD4L4Q8WXT5 416 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 VWCEQ96DN2 955 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 DEFB118Q96PH6 123 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 POLR3FQ9H1D9 316 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 KIAA1586Q9HCI6 787 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 EXOC7Q9UPT5 735 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 LRRC10BA6NIK2 292 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CHMP2AO43633 222 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PHKA2P46019 1235 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 POLGP54098 1239 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 LRSAM1Q6UWE0 723 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 BSNDQ8WZ55 320 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CELF4Q9BZC1 486 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TSC2P49815 1807 aa12.32□□□□□ -0.44
CSGALNACT2-201ENST00000374466 COL4A4P53420 1690 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 DDX39AO00148 427 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FAAP100Q0VG06 881 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 EFCAB12Q6NXP0 572 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SCFD1Q8WVM8 642 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TYW1Q9NV66 732 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SAMM50Q9Y512 469 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 KIAA1671Q9BY89 1806 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 B4GALT4O60513 344 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 BAIAP3O94812 1187 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SKIP12755 728 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 GPNMBQ14956 572 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FAM26FQ5R3K3 315 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 RUFY4Q6ZNE9 571 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 LENG1Q96BZ8 264 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TMEM106CQ9BVX2 250 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FTHL17Q9BXU8 183 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms