RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 LRRCC1Q9C099 1032 aa14.13□□□□□ -0.15
HDAC8-204ENST00000373560 PRMT8Q9NR22 394 aaPredicted RBP14.13□□□□□ -0.15
HDAC8-204ENST00000373560 SLC2A4RGQ9NR83 387 aa14.13□□□□□ -0.15
HDAC8-204ENST00000373560 PKD2L1Q9P0L9 805 aa14.13□□□□□ -0.15
HDAC8-204ENST00000373560 NUMBLQ9Y6R0 609 aa14.13□□□□□ -0.15
HDAC8-204ENST00000373560 ITPR1Q14643 2758 aa14.12□□□□□ -0.15
HDAC8-204ENST00000373560 KANSL1LA0AUZ9 987 aa14.12□□□□□ -0.15
HDAC8-204ENST00000373560 SRRM3A6NNA2 597 aaPredicted RBP14.12□□□□□ -0.15
HDAC8-204ENST00000373560 TDGF1P13385 188 aa14.12□□□□□ -0.15
HDAC8-204ENST00000373560 GPC5P78333 572 aa14.12□□□□□ -0.15
HDAC8-204ENST00000373560 HELQQ8TDG4 1101 aa14.12□□□□□ -0.15
HDAC8-204ENST00000373560 MTMR8Q96EF0 704 aa14.12□□□□□ -0.15
HDAC8-204ENST00000373560 ELAC1Q9H777 363 aaKnown RBP14.12□□□□□ -0.15
HDAC8-204ENST00000373560 WDR6Q9NNW5 1121 aaKnown RBP14.12□□□□□ -0.15
HDAC8-204ENST00000373560 IRAK3Q9Y616 596 aa14.12□□□□□ -0.15
HDAC8-204ENST00000373560 BAZ2BQ9UIF8 2168 aaKnown RBP14.12□□□□□ -0.15
HDAC8-204ENST00000373560 DSPP15924 2871 aaKnown RBP14.11□□□□□ -0.15
HDAC8-204ENST00000373560 ANHXE9PGG2 379 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 GCOM1H8Y6P7 765 aaPredicted RBP14.11□□□□□ -0.15
HDAC8-204ENST00000373560 B4GALT3O60512 393 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 HMMRO75330 724 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 POLR2MP0CAP2 368 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 TARSP26639 723 aaKnown RBP14.11□□□□□ -0.15
HDAC8-204ENST00000373560 ASPRV1Q53RT3 343 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 KDF1Q8NAX2 398 aaPredicted RBP14.11□□□□□ -0.15
HDAC8-204ENST00000373560 RNF169Q8NCN4 708 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 KLHL5Q96PQ7 755 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 OSMRQ99650 979 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 RXFP3Q9NSD7 469 aa14.11□□□□□ -0.15
HDAC8-204ENST00000373560 GREB1Q4ZG55 1949 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 SMIM35A0A1B0GVV1 85 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 RRN3P2A6NIE6 340 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 FAM170BA6NMN3 283 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 TM4SF5O14894 197 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 RFPL2O75678 378 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 TOP3BO95985 862 aaKnown RBP14.1□□□□□ -0.15
HDAC8-204ENST00000373560 FGAP02671 866 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 SSBP05455 408 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC8-204ENST00000373560 CNPP09543 421 aaKnown RBP14.1□□□□□ -0.15
HDAC8-204ENST00000373560 NONOQ15233 471 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC8-204ENST00000373560 CCDC6Q16204 474 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 LAIR1Q6GTX8 287 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 MTHFD1LQ6UB35 978 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 C15orf39Q6ZRI6 1047 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 GET4Q7L5D6 327 aaPredicted RBP14.1□□□□□ -0.15
HDAC8-204ENST00000373560 ECHDC2Q86YB7 292 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 ZNF454Q8N9F8 522 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 SEPT1Q8WYJ6 367 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 FGF14Q92915 247 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 TMEM169Q96HH4 297 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 SENP7Q9BQF6 1050 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 LTB4R2Q9NPC1 389 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 MAN1C1Q9NR34 630 aa14.1□□□□□ -0.15
HDAC8-204ENST00000373560 MAP3K20Q9NYL2 800 aaKnown RBP14.1□□□□□ -0.15
HDAC8-204ENST00000373560 TRIM6-TRIM34B2RNG4 842 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 TAF4O00268 1085 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 SRSF5Q13243 272 aaKnown RBP14.09□□□□□ -0.15
HDAC8-204ENST00000373560 MLF2Q15773 248 aaPredicted RBP14.09□□□□□ -0.15
HDAC8-204ENST00000373560 KIZQ2M2Z5 673 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 PRR23BQ6ZRT6 265 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 HOMER1Q86YM7 354 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 TMEM87AQ8NBN3 555 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 PI4K2BQ8TCG2 481 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 ZNF707Q96C28 371 aaPredicted RBP14.09□□□□□ -0.15
HDAC8-204ENST00000373560 SMARCAD1Q9H4L7 1026 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 MAST4O15021 2626 aa14.09□□□□□ -0.15
HDAC8-204ENST00000373560 DMXL2Q8TDJ6 3036 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 SHISA7A6NL88 538 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 ZBTB5O15062 677 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 INPPL1O15357 1258 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDAC8-204ENST00000373560 RETP07949 1114 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 PARP1P09874 1014 aaKnown RBP14.08□□□□□ -0.16
HDAC8-204ENST00000373560 LAMP2P13473 410 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 FZD5Q13467 585 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 ALX1Q15699 326 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 CSRP2Q16527 193 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 PARM1Q6UWI2 310 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 DGKHQ86XP1 1220 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 KIAA0319LQ8IZA0 1049 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 ABI1Q8IZP0 508 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 OTUD7AQ8TE49 926 aaPredicted RBP14.08□□□□□ -0.16
HDAC8-204ENST00000373560 BORCS6Q96GS4 357 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 IGSF21Q96ID5 467 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 KAT14Q9H8E8 782 aa14.08□□□□□ -0.16
HDAC8-204ENST00000373560 GPR182O15218 404 aa14.07□□□□□ -0.16
HDAC8-204ENST00000373560 STAM2O75886 525 aa14.07□□□□□ -0.16
HDAC8-204ENST00000373560 RPLP2P05387 115 aaKnown RBP14.07□□□□□ -0.16
HDAC8-204ENST00000373560 ITGB5P18084 799 aa14.07□□□□□ -0.16
HDAC8-204ENST00000373560 KLRC2P26717 231 aa14.07□□□□□ -0.16
HDAC8-204ENST00000373560 MTAPQ13126 283 aa14.07□□□□□ -0.16
HDAC8-204ENST00000373560 SF3A2Q15428 464 aaKnown RBP14.07□□□□□ -0.16
HDAC8-204ENST00000373560 DDX53Q86TM3 631 aaKnown RBP14.07□□□□□ -0.16
HDAC8-204ENST00000373560 ZNF598Q86UK7 904 aaKnown RBP14.07□□□□□ -0.16
HDAC8-204ENST00000373560 ENAHQ8N8S7 591 aaPredicted RBP14.07□□□□□ -0.16
HDAC8-204ENST00000373560 CMASQ8NFW8 434 aaPredicted RBP14.07□□□□□ -0.16
HDAC8-204ENST00000373560 DDX12PQ92771 950 aa14.07□□□□□ -0.16
HDAC8-204ENST00000373560 NXPE3Q969Y0 559 aa14.07□□□□□ -0.16
HDAC8-204ENST00000373560 PIGSQ96S52 555 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms