RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 GCOM2Q9BZD3 368 aaPredicted RBP18.13■□□□□ 0.49
HDAC8-202ENST00000373556 GJB4Q9NTQ9 266 aa18.13■□□□□ 0.49
HDAC8-202ENST00000373556 PUF60Q9UHX1 559 aaKnown RBP18.13■□□□□ 0.49
HDAC8-202ENST00000373556 LOC730098B7Z3J9 87 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
HDAC8-202ENST00000373556 PPM1AP35813 382 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 DNM2P50570 870 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 LONRF3Q496Y0 759 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 HFE2Q6ZVN8 426 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 ANO5Q75V66 913 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 RHPN2Q8IUC4 686 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 KSR1Q8IVT5 923 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 PHF20Q9BVI0 1012 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 APOL5Q9BWW9 433 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 DACT1Q9NYF0 836 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 SPG21Q9NZD8 308 aa18.12■□□□□ 0.49
HDAC8-202ENST00000373556 SUCLA2Q9P2R7 463 aaPredicted RBP18.12■□□□□ 0.49
HDAC8-202ENST00000373556 TECTAO75443 2155 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 CCDC194A0A1B0GVG4 234 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 NT5C1B-RDH14C9J2C7 533 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 MAFO75444 373 aaPredicted RBP18.11■□□□□ 0.49
HDAC8-202ENST00000373556 EOMESO95936 686 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 TECP42680 631 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 PSMC5P62195 406 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 KRT17Q04695 432 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 TMC7Q7Z402 723 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 FAM177A1Q8N128 213 aaPredicted RBP18.11■□□□□ 0.49
HDAC8-202ENST00000373556 OXER1Q8TDS5 423 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 LPPQ93052 612 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 RPGRIP1Q96KN7 1286 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 NLRP4Q96MN2 994 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 PHF7Q9BWX1 381 aaPredicted RBP18.11■□□□□ 0.49
HDAC8-202ENST00000373556 SLKQ9H2G2 1235 aaPredicted RBP18.11■□□□□ 0.49
HDAC8-202ENST00000373556 VAV3Q9UKW4 847 aa18.11■□□□□ 0.49
HDAC8-202ENST00000373556 PIN4Q9Y237 131 aaKnown RBP18.11■□□□□ 0.49
HDAC8-202ENST00000373556 FSD2A1L4K1 749 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 CDKL5O76039 1030 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 SFPQP23246 707 aaKnown RBP eCLIP18.1■□□□□ 0.49
HDAC8-202ENST00000373556 PHKA2P46019 1235 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 NPEPPSP55786 919 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 CDC42EP1Q00587 391 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 KCNC3Q14003 757 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 TWF2Q6IBS0 349 aaKnown RBP18.1■□□□□ 0.49
HDAC8-202ENST00000373556 ANKRD54Q6NXT1 300 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 NEK8Q86SG6 692 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 SLC39A11Q8N1S5 342 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 ZNF579Q8NAF0 562 aaKnown RBP18.1■□□□□ 0.49
HDAC8-202ENST00000373556 EDAQ92838 391 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 KCNMB3Q9NPA1 279 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 NGRNQ9NPE2 291 aaKnown RBP18.1■□□□□ 0.49
HDAC8-202ENST00000373556 CHST12Q9NRB3 414 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 WRAP73Q9P2S5 460 aaPredicted RBP18.1■□□□□ 0.49
HDAC8-202ENST00000373556 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
HDAC8-202ENST00000373556 ZNF318Q5VUA4 2279 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 CCNT1O60563 726 aaKnown RBP18.09■□□□□ 0.49
HDAC8-202ENST00000373556 SRGAP2BP0DMP2 458 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 CA8P35219 290 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 BCAR1P56945 870 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 PPP2R5CQ13362 524 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 TMEM184AQ6ZMB5 413 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 PIK3AP1Q6ZUJ8 805 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 ZNF410Q86VK4 478 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 SUSD6Q92537 303 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 MRPL9Q9BYD2 267 aaKnown RBP18.09■□□□□ 0.49
HDAC8-202ENST00000373556 S1PR5Q9H228 398 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 CYP26B1Q9NR63 512 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 BMP2KQ9NSY1 1161 aaPredicted RBP18.09■□□□□ 0.49
HDAC8-202ENST00000373556 WDFY4Q6ZS81 3184 aa18.09■□□□□ 0.49
HDAC8-202ENST00000373556 STK36Q9NRP7 1315 aa18.08■□□□□ 0.49
HDAC8-202ENST00000373556 MEIS3P2A8K0S8 358 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 PFKFB2O60825 505 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
HDAC8-202ENST00000373556 QARSP47897 775 aaKnown RBP18.08■□□□□ 0.48
HDAC8-202ENST00000373556 ALDH7A1P49419 539 aaKnown RBP18.08■□□□□ 0.48
HDAC8-202ENST00000373556 CBX2Q14781 532 aaPredicted RBP18.08■□□□□ 0.48
HDAC8-202ENST00000373556 EARS2Q5JPH6 523 aaKnown RBP18.08■□□□□ 0.48
HDAC8-202ENST00000373556 PPP4R3AQ6IN85 833 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 SYCE2Q6PIF2 218 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 CATSPER4Q7RTX7 472 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 HAS1Q92839 578 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 FAM20AQ96MK3 541 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 INO80BQ9C086 356 aaPredicted RBP18.08■□□□□ 0.48
HDAC8-202ENST00000373556 CDH22Q9UJ99 828 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 INPP5FQ9Y2H2 1132 aa18.08■□□□□ 0.48
HDAC8-202ENST00000373556 ARID2Q68CP9 1835 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 FAM205CA6NFA0 338 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 C2orf71A6NGG8 1288 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 CTDNEP1O95476 244 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 XBP1P17861 261 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 SP100P23497 879 aaPredicted RBP18.07■□□□□ 0.48
HDAC8-202ENST00000373556 SMC1AQ14683 1233 aaKnown RBP18.07■□□□□ 0.48
HDAC8-202ENST00000373556 NCAPH2Q6IBW4 605 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 TMEM173Q86WV6 379 aaPredicted RBP18.07■□□□□ 0.48
HDAC8-202ENST00000373556 POTEDQ86YR6 584 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 TMEM143Q96AN5 459 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 CEP170P1Q96L14 293 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 JPH2Q9BR39 696 aaPredicted RBP18.07■□□□□ 0.48
HDAC8-202ENST00000373556 TRAIPQ9BWF2 469 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 IFT122Q9HBG6 1241 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 FAM105AQ9NUU6 356 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms