RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ACTR5Q9H9F9 607 aaPredicted RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 GABBR1Q9UBS5 961 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 ANAPC7Q9UJX3 599 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 SPP2Q13103 211 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 TBC1D10BQ4KMP7 808 aaPredicted RBP11.25□□□□□ -0.61
NUP188-201ENST00000372577 ENGASEQ8NFI3 743 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 CALN1Q9BXU9 219 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 IL25Q9H293 177 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 ASNSD1Q9NWL6 643 aa11.25□□□□□ -0.61
NUP188-201ENST00000372577 FGFR2P21802 821 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 PSMA2P25787 234 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 GPC3P51654 580 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 TACC3Q9Y6A5 838 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 TYW5A2RUC4 315 aaKnown RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 NDUFB10O96000 172 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 STAT3P40763 770 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 IFRD2Q12894 506 aaPredicted RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 ZNF699Q32M78 642 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 MUM1L1Q5H9M0 696 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 RASGRP2Q7LDG7 609 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 AP1M1Q9BXS5 423 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 ARHGAP23Q9P227 1491 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 IQANK1A0A1B0GTG1 560 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 EIF3DO15371 548 aaKnown RBP eCLIP11.24□□□□□ -0.61
NUP188-201ENST00000372577 SH3BP5O60239 455 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 FCER1AP12319 257 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 CAPN12Q6ZSI9 719 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 SCYL1Q96KG9 808 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 IP6K2Q9UHH9 426 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 NFU1Q9UMS0 254 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 EXOC1LA0A1B0GW35 172 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 ASB14A6NK59 587 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 MAFGO15525 162 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 MT-ND3P03897 115 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 ITKQ08881 620 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 RPS6KA2Q15349 733 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 RSRC2Q7L4I2 434 aaKnown RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 FASTKD5Q7L8L6 764 aaKnown RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 CATSPER4Q7RTX7 472 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 DDX56Q9NY93 547 aaKnown RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 SLC9A2Q9UBY0 812 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 CTNND1O60716 968 aaKnown RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 ACTN1P12814 892 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 CCZ1BP86790 482 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 CCZ1P86791 482 aaPredicted RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 EEPD1Q7L9B9 569 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 HAUS6Q7Z4H7 955 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 ZNF564Q8TBZ8 553 aaPredicted RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 RIT2Q99578 217 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 FAM213AQ9BRX8 229 aa11.24□□□□□ -0.61
NUP188-201ENST00000372577 POLR3FQ9H1D9 316 aaPredicted RBP11.24□□□□□ -0.61
NUP188-201ENST00000372577 ZBED1O96006 694 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 BASP1P80723 227 aaKnown RBP11.23□□□□□ -0.61
NUP188-201ENST00000372577 TROAPQ12815 778 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 ZNF568Q3ZCX4 644 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 SWSAP1Q6NVH7 229 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 RSBN1LQ6PCB5 846 aaPredicted RBP11.23□□□□□ -0.61
NUP188-201ENST00000372577 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 FBXL13Q8NEE6 735 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 MKNK1Q9BUB5 465 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 AGXT2Q9BYV1 514 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 VCPKMTQ9H867 229 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 FAM170AA1A519 330 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 DGAT1O75907 488 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 DHX34Q14147 1143 aaKnown RBP11.23□□□□□ -0.61
NUP188-201ENST00000372577 BEST2Q8NFU1 509 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 RPAP3Q9H6T3 665 aaPredicted RBP11.23□□□□□ -0.61
NUP188-201ENST00000372577 AFG3L2Q9Y4W6 797 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 TMED2Q15363 201 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 HVCN1Q96D96 273 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 HGSO14964 777 aaPredicted RBP11.23□□□□□ -0.61
NUP188-201ENST00000372577 KRT7P08729 469 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 MUTP22033 750 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 ECE1P42892 770 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 SH3BGRP55822 239 aaPredicted RBP11.23□□□□□ -0.61
NUP188-201ENST00000372577 CDC42EP1Q00587 391 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 CYP4F22Q6NT55 531 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 SAMD3Q8N6K7 520 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 C7orf31Q8N865 590 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 C2orf69Q8N8R5 385 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 NUF2Q9BZD4 464 aa11.23□□□□□ -0.61
NUP188-201ENST00000372577 RPS12P25398 132 aaKnown RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 YWHABP31946 246 aaKnown RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 ARL4CP56559 192 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 COG2Q14746 738 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 RDM1Q8NG50 284 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 GTF3C2Q8WUA4 911 aaPredicted RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 STK33Q9BYT3 514 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 KLC2Q9H0B6 622 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 NOVA2Q9UNW9 492 aaKnown RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 A0A087WUV0 522 aaPredicted RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 SLC1A1P43005 524 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 CLNS1AP54105 237 aaKnown RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 SLC7A5Q01650 507 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 FMR1Q06787 632 aaKnown RBP eCLIP11.22□□□□□ -0.617e-7■■■■□ 24.6
NUP188-201ENST00000372577 XKR3Q5GH77 459 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 THNSL1Q8IYQ7 743 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 CCNYQ8ND76 341 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 PYROXD1Q8WU10 500 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 SYN2Q92777 582 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms