RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 TBK1Q9UHD2 729 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 PCDHA13Q9Y5I0 950 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 POTEIP0CG38 1075 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 PSMA2P25787 234 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 PSMC5P62195 406 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 ASPHQ12797 758 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 POTEGQ6S5H5 508 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 SOWAHDA6NJG2 315 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 MAFGO15525 162 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 TRIM28Q13263 835 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 PRAMEF18Q5VWM3 479 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 MB21D1Q8N884 522 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 NEDD1Q8NHV4 660 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 SLC9A2Q9UBY0 812 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 SCAF8Q9UPN6 1271 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 IPO5O00410 1097 aaKnown RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 NR3C1P04150 777 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 INHBAP08476 426 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 RCAN1P53805 252 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 LBHD1Q9BQE6 289 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 KIAA1586Q9HCI6 787 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 SPTLC3Q9NUV7 552 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 FBXL5Q9UKA1 691 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 INTUQ9ULD6 942 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 PNPLA6Q8IY17 1366 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 GOLGA8KD6RF30 607 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 NTSR2O95665 410 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 TMED2Q15363 201 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 C10orf76Q5T2E6 689 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 CFAP61Q8NHU2 1237 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 SH3KBP1Q96B97 665 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 ZFYVE28Q9HCC9 887 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 MYOZ2Q9NPC6 264 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 BAIAP2L1Q9UHR4 511 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 INO80Q9ULG1 1556 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 CNTNAP4Q9C0A0 1308 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 LRRD1A4D1F6 860 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 RNF40O75150 1001 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 TRIM67Q6ZTA4 783 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 CYFIP1Q7L576 1253 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 PASD1Q8IV76 773 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 ARHGAP24Q8N264 748 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 ZNF280CQ8ND82 737 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 PPWD1Q96BP3 646 aaKnown RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 PARK7Q99497 189 aaKnown RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 EIF2AK1Q9BQI3 630 aaKnown RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 ECEL1O95672 775 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 MOCS2O96007 188 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 CREB3O43889 395 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 TDP2O95551 362 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 RECQLP46063 649 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 CAPRIN1Q14444 709 aaKnown RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 COG2Q14746 738 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 ERLEC1Q96DZ1 483 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 HAUS8Q9BT25 410 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 MRPL4Q9BYD3 311 aaKnown RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 CFLARO15519 480 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 TTC4O95801 387 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 TXNP10599 105 aaKnown RBP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 NUMBP49757 651 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 SLC15A2Q16348 729 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL4A6-202ENST00000372216 PBXIP1Q96AQ6 731 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 TTC1Q99614 292 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 DNAJC12Q9UKB3 198 aa10.49□□□□□ -0.73
COL4A6-202ENST00000372216 KDM6AO15550 1401 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 CEP170BQ9Y4F5 1589 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 EVI5O60447 810 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 C2orf54Q08AI8 447 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 KRT31Q15323 416 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 KIF19Q2TAC6 998 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 DOLKQ9UPQ8 538 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 PTPRUQ92729 1446 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 EFCAB8A8MWE9 144 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 CASP1P29466 404 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 GCLMP48507 274 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 ZBED6P86452 979 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 NME3Q13232 169 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 RABL6Q3YEC7 729 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 XXYLT1Q8NBI6 393 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 CPS1P31327 1500 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 TRIM49BA6NDI0 452 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 NCF2P19878 526 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 CYP4F22Q6NT55 531 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 KCNV1Q6PIU1 500 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 EFCAB13Q8IY85 973 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 IFT43Q96FT9 208 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 C19orf81C9J6K1 198 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 KBTBD13C9JR72 458 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 H3BRJ5 948 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 MAP3K7O43318 606 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 CELF2O95319 508 aaKnown RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 APOEP02649 317 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 STX1BP61266 288 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 TRIM59Q8IWR1 403 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 CABS1Q96KC9 395 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 HOMER3Q9NSC5 361 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms