RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TRPC6Q9Y210 931 aa28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 AOC2O75106 756 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 SKILP12757 684 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 APLP1P51693 650 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 PPP2R3AQ06190 1150 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 CCDC112Q8NEF3 446 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 OR6J1Q8NGC5 347 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 TMEM143Q96AN5 459 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 MKNK1Q9BUB5 465 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 DENND3A2RUS2 1198 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 AKR1B15C9JRZ8 316 aaPredicted RBP28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 AKAP3O75969 853 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 CEP135Q66GS9 1140 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 DMAC2Q9NW81 257 aa28.85■■■□□ 2.21
ATPAF1-202ENST00000371937 PSMC2P35998 433 aaKnown RBP28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 CCZ1BP86790 482 aa28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 CCZ1P86791 482 aaPredicted RBP28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 RBL2Q08999 1139 aa28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 MAP4K3Q8IVH8 894 aa28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 C12orf56Q8IXR9 622 aa28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 TCP11Q8WWU5 503 aa28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 IKZF4Q9H2S9 585 aa28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 FRMD4BQ9Y2L6 1034 aa28.84■■■□□ 2.21
ATPAF1-202ENST00000371937 NAMPTP43490 491 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 PSMC4P43686 418 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 LACTBP83111 547 aaPredicted RBP28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 CCL14Q16627 93 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 CNGA4Q8IV77 575 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 TC2NQ8N9U0 490 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 KCNN1Q92952 543 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 NUP58Q9BVL2 599 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 ARHGAP28Q9P2N2 729 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 ZNF215Q9UL58 517 aaPredicted RBP28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 PYCARDQ9ULZ3 195 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 GYPCP04921 128 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 ZNF865P0CJ78 1059 aaPredicted RBP28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 XRCC5P13010 732 aaKnown RBP28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 HOXD8P13378 290 aaPredicted RBP28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 CYP2C19P33261 490 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 SYCP1Q15431 976 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 PRAMEF19Q5SWL8 479 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 IER5Q5VY09 327 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 RETREG2Q8NC44 543 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 KIAA1524Q8TCG1 905 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 KIFC3Q9BVG8 833 aa28.83■■■□□ 2.21
ATPAF1-202ENST00000371937 ZBTB42B2RXF5 422 aa28.82■■■□□ 2.2
ATPAF1-202ENST00000371937 ZNF500O60304 480 aaPredicted RBP28.82■■■□□ 2.2
ATPAF1-202ENST00000371937 IGHA2P01877 340 aa28.82■■■□□ 2.2
ATPAF1-202ENST00000371937 GLRA2P23416 452 aa28.82■■■□□ 2.2
ATPAF1-202ENST00000371937 CTGFP29279 349 aa28.82■■■□□ 2.2
ATPAF1-202ENST00000371937 DGKDQ16760 1214 aa28.82■■■□□ 2.2
ATPAF1-202ENST00000371937 ZNF484Q5JVG2 852 aa28.82■■■□□ 2.2
ATPAF1-202ENST00000371937 IQCDQ96DY2 449 aa28.82■■■□□ 2.2
ATPAF1-202ENST00000371937 CASP14P31944 242 aa28.81■■■□□ 2.2
ATPAF1-202ENST00000371937 CASP4P49662 377 aa28.81■■■□□ 2.2
ATPAF1-202ENST00000371937 ADKP55263 362 aaKnown RBP28.81■■■□□ 2.2
ATPAF1-202ENST00000371937 FAM186BQ8IYM0 893 aa28.81■■■□□ 2.2
ATPAF1-202ENST00000371937 CPLX3Q8WVH0 158 aa28.81■■■□□ 2.2
ATPAF1-202ENST00000371937 CCDC51Q96ER9 411 aa28.81■■■□□ 2.2
ATPAF1-202ENST00000371937 PANX2Q96RD6 677 aa28.81■■■□□ 2.2
ATPAF1-202ENST00000371937 MGAMO43451 1857 aa28.81■■■□□ 2.2
ATPAF1-202ENST00000371937 IGKV6-21A0A0C4DH24 114 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 MFAP3LO75121 409 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 MMP3P08254 477 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 CYP2J2P51589 502 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 ASAP3Q8TDY4 903 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 PCMTD1Q96MG8 357 aaPredicted RBP28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 C16orf70Q9BSU1 422 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 TMX1Q9H3N1 280 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 RNPEPQ9H4A4 650 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 GNEQ9Y223 722 aaKnown RBP28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 ADGRA3Q8IWK6 1321 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 EXOC3O60645 756 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 ZNF784Q8NCA9 323 aaPredicted RBP28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 DEPTORQ8TB45 409 aa28.8■■■□□ 2.2
ATPAF1-202ENST00000371937 H3BRB1 525 aa28.79■■■□□ 2.2
ATPAF1-202ENST00000371937 GOLGA8FQ08AF8 430 aa28.79■■■□□ 2.2
ATPAF1-202ENST00000371937 GOLGA8DPQ0D2H9 430 aa28.79■■■□□ 2.2
ATPAF1-202ENST00000371937 MXD4Q14582 209 aaPredicted RBP28.79■■■□□ 2.2
ATPAF1-202ENST00000371937 TUT1Q9H6E5 874 aaKnown RBP28.79■■■□□ 2.2
ATPAF1-202ENST00000371937 SUGCTQ9HAC7 445 aa28.79■■■□□ 2.2
ATPAF1-202ENST00000371937 LRRIQ4A6NIV6 560 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 DYNC1LI2O43237 492 aaPredicted RBP28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 ADCY6O43306 1168 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 TRIM21P19474 475 aaKnown RBP28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 KCNH2Q12809 1159 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 KIF22Q14807 665 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 BRDTQ58F21 947 aaPredicted RBP28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 FIGNQ5HY92 759 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 PSPC1Q8WXF1 523 aaKnown RBP28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 BORCS6Q96GS4 357 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 Q9Y3F1 56 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 A6NJR5 290 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 ZNF286BP0CG31 522 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 YY1P25490 414 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 CNGA1P29973 690 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 FXR1P51114 621 aaKnown RBP eCLIP28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 STRN3Q13033 797 aa28.78■■■□□ 2.2
ATPAF1-202ENST00000371937 PRPF31Q8WWY3 499 aaKnown RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms