RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 RCN1Q15293 331 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 PLA2G4DQ86XP0 818 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 TMA16Q96EY4 203 aaKnown RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 BTBD18B2RXH4 712 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 ASAP2O43150 1006 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 CAND2O75155 1236 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 XPAP23025 273 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 PLOD1Q02809 727 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 LRRC63Q05C16 580 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 DCTN2Q13561 401 aaKnown RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 NARS2Q96I59 477 aaKnown RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 RBM41Q96IZ5 413 aaKnown RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 ZSCAN10Q96SZ4 725 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 VPS11Q9H270 941 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 FBXL5Q9UKA1 691 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 GAP43P17677 238 aa16.21■□□□□ 0.18
COL5A1-201ENST00000371817 AKAP4Q5JQC9 854 aa16.21■□□□□ 0.18
COL5A1-201ENST00000371817 ANKRD36BP1Q96IX9 119 aa16.21■□□□□ 0.18
COL5A1-201ENST00000371817 ERFP50548 548 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 ATP11CQ8NB49 1132 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 HNRNPDLO14979 420 aaKnown RBP16.2■□□□□ 0.18
COL5A1-201ENST00000371817 NLRP11P59045 1033 aaKnown RBP16.2■□□□□ 0.18
COL5A1-201ENST00000371817 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 IGF2BP3O00425 579 aaKnown RBP eCLIP16.2■□□□□ 0.18
COL5A1-201ENST00000371817 CHRNA3P32297 505 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 ABCD1P33897 745 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 ALKBH5Q6P6C2 394 aaKnown RBP16.2■□□□□ 0.18
COL5A1-201ENST00000371817 ARL10Q8N8L6 244 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 MEIS1O00470 390 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 FOXP2O15409 715 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 FBXW4P57775 412 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 RPS6P62753 249 aaKnown RBP16.2■□□□□ 0.18
COL5A1-201ENST00000371817 CSTF3Q12996 717 aaKnown RBP16.2■□□□□ 0.18
COL5A1-201ENST00000371817 TTC13Q8NBP0 860 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 ZFATQ9P243 1243 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 TRIM24O15164 1050 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 FAM107AO95990 144 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 PTK2BQ14289 1009 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 MAPRE1Q15691 268 aaKnown RBP16.2■□□□□ 0.18
COL5A1-201ENST00000371817 MDH1BQ5I0G3 518 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 CCNYL1Q8N7R7 359 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 GLMNQ92990 594 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 BTBD7Q9P203 1132 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 PITPNM2Q9BZ72 1349 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 SNPHO15079 494 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 CHN1P15882 459 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 ELMSAN1Q6PJG2 1045 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 LRRC49Q8IUZ0 686 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 FAM153AQ9UHL3 310 aa16.2■□□□□ 0.18
COL5A1-201ENST00000371817 CMTR1Q8N1G2 835 aaKnown RBP16.19■□□□□ 0.18
COL5A1-201ENST00000371817 TRIM39Q9HCM9 518 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 SLC12A6Q9UHW9 1150 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 LCMT1Q9UIC8 334 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 MCM8Q9UJA3 840 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 ADGRA3Q8IWK6 1321 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 MYH11P35749 1972 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 POLGP54098 1239 aaPredicted RBP16.19■□□□□ 0.18
COL5A1-201ENST00000371817 SNAP25P60880 206 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 XKR9Q5GH70 373 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 SMCR8Q8TEV9 937 aaPredicted RBP16.19■□□□□ 0.18
COL5A1-201ENST00000371817 EYA2O00167 538 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 C19orf18Q8NEA5 215 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 USP33Q8TEY7 942 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 BPIFA3Q9BQP9 254 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 TMEM161AQ9NX61 479 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 STX7O15400 261 aaKnown RBP16.19■□□□□ 0.18
COL5A1-201ENST00000371817 CLPTM1O96005 669 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 ALBP02768 609 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 ITGB3BPQ13352 177 aaPredicted RBP16.19■□□□□ 0.18
COL5A1-201ENST00000371817 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 SLITRK6Q9H5Y7 841 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 PSMC3P17980 439 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 NSUN2Q08J23 767 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL5A1-201ENST00000371817 GPS1Q13098 491 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 NDST4Q9H3R1 872 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.19■□□□□ 0.18
COL5A1-201ENST00000371817 AGTP01019 485 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 KRT76Q01546 638 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 MFN1Q8IWA4 741 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 FSD1LQ9BXM9 530 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 ADAMTS1Q9UHI8 967 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 ITM2BQ9Y287 266 aa16.19■□□□□ 0.18
COL5A1-201ENST00000371817 DHX34Q14147 1143 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 ERP27Q96DN0 273 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 NLRP4Q96MN2 994 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 PRXQ9BXM0 1461 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 MFN2O95140 757 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 KLHL2O95198 593 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 TRADDQ15628 312 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 PCYOX1LQ8NBM8 494 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 HSPH1Q92598 858 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 CAAP1Q9H8G2 361 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 TLR3O15455 904 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 GGPS1O95749 300 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 FAM200BP0CF97 657 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 HSPA2P54652 639 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 FANCBQ8NB91 859 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 RSPH1Q8WYR4 309 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms