RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 CASP2P42575 452 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 IL1RL1Q01638 556 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP17L6PQ6QN14 398 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 ATG9AQ7Z3C6 839 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 RNF25Q96BH1 459 aaPredicted RBP18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 CDHR1Q96JP9 859 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 FAM20AQ96MK3 541 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 MAGED2Q9UNF1 606 aaPredicted RBP18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 TAF6LQ9Y6J9 622 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 GOLGA8MH3BSY2 632 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 GNGT2O14610 69 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 FGFR4P22455 802 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 IGBP1P78318 339 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 PPP1R18Q6NYC8 613 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 PHF20L1A8MW92 1017 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 AP2B1P63010 937 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 KRT39Q6A163 491 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 CC2D2BQ6DHV5 1058 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 ZIM3Q96PE6 472 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 PRMT1Q99873 361 aaKnown RBP18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 C11orf70Q9BRQ4 267 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 FAM96AQ9H5X1 160 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 POTEFA5A3E0 1075 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 CTDNEP1O95476 244 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 POTEIP0CG38 1075 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 NCAPHQ15003 741 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 KIAA1755Q5JYT7 1200 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 POTEGQ6S5H5 508 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 POTEEQ6S8J3 1075 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 IGDCC4Q8TDY8 1250 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 TTC1Q99614 292 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 BATF3Q9NR55 127 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 NDE1Q9NXR1 346 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 GLI2P10070 1586 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 RHOBTB3O94955 611 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 CHN1P15882 459 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 SOX5P35711 763 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 SCARA5Q6ZMJ2 495 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 SLC44A5Q8NCS7 719 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 PHF20Q9BVI0 1012 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 PNPLA7Q6ZV29 1317 aa18.3■□□□□ 0.52
PTP4A1-201ENST00000370651 CFAP69A5D8W1 941 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 PPEF1O14829 653 aaPredicted RBP18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 TDP2O95551 362 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 FSCBQ5H9T9 825 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 TMEM35BQ8NCS4 154 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 SEC16BQ96JE7 1060 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 LMTK3Q96Q04 1460 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 RFX1P22670 979 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 FRMD5Q7Z6J6 570 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 HSPH1Q92598 858 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 FUCA2Q9BTY2 467 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 NRKQ7Z2Y5 1582 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 EPHB1P54762 984 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 ZBTB33Q86T24 672 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 MMGT1Q8N4V1 131 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 SRBD1Q8N5C6 995 aaKnown RBP18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 XPO6Q96QU8 1125 aaKnown RBP18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 STK32BQ9NY57 414 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 GGT7Q9UJ14 662 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 CRB1P82279 1406 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 K7ERI5 159 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 KRT10P13645 584 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 SNAP25P60880 206 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 THOC5Q13769 683 aaKnown RBP18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 TFDP2Q14188 446 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 AGBL2Q5U5Z8 902 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 C1orf54Q8WWF1 131 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 NRBF2Q96F24 287 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 MSTO1Q9BUK6 570 aa18.29■□□□□ 0.52
PTP4A1-201ENST00000370651 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 CLRN2A0PK11 232 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 ORC4O43929 436 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 SURF1Q15526 300 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 HPS3Q969F9 1004 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 SMARCAL1Q9NZC9 954 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 ORC6Q9Y5N6 252 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 CARSP49589 748 aaKnown RBP18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 VAMP7P51809 220 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 SEC24CP53992 1094 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 GPS1Q13098 491 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 IZUMO3Q5VZ72 239 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 SLFN12LQ6IEE8 588 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 RGS9BPQ6ZS82 235 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 ARHGAP18Q8N392 663 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 C7orf31Q8N865 590 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 PNKPQ96T60 521 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 ISCA1Q9BUE6 129 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms