RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 PLEKHA8P1O95397 391 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 TOP1P11387 765 aaKnown RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 EEF2P13639 858 aaKnown RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 CAP2P40123 477 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 GIPRP48546 466 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 RCAN1P53805 252 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 HP1BP3Q5SSJ5 553 aaPredicted RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 RASIP1Q5U651 963 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 CATIPQ7Z7H3 387 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 CCDC84Q86UT8 332 aaPredicted RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 ACER1Q8TDN7 264 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 DCPSQ96C86 337 aaKnown RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 LLPHQ9BRT6 129 aaKnown RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 YIPF2Q9BWQ6 316 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 OSBPL1AQ9BXW6 950 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 GLIS2Q9BZE0 524 aaPredicted RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 CHMP5Q9NZZ3 219 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 NYAP2Q9P242 653 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 PFDN2Q9UHV9 154 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 ZNF112Q9UJU3 913 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 SMC3Q9UQE7 1217 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 SCN4AP35499 1836 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 IQCA1LA6NCM1 817 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 TMPRSS2O15393 492 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 USP2O75604 605 aaPredicted RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 DDAH1O94760 285 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 TTLL1O95922 423 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 F13A1P00488 732 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 GOLGA8HP0CJ92 632 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 GRM4Q14833 912 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 RAB3GAP1Q15042 981 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 C2orf27AQ580R0 203 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 KIAA1755Q5JYT7 1200 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 SNAP47Q5SQN1 464 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 SYNE3Q6ZMZ3 975 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 TMEM179Q6ZVK1 233 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 KRT26Q7Z3Y9 468 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 PDZD3Q86UT5 571 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 LRRC47Q8N1G4 583 aaKnown RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 SRBD1Q8N5C6 995 aaKnown RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 JMYQ8N9B5 988 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 EZH1Q92800 747 aaPredicted RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 PHKBQ93100 1093 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 AIFM3Q96NN9 605 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 ACSS3Q9H6R3 686 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 LRRC4CQ9HCJ2 640 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 NMRK2Q9NPI5 230 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 TYW1Q9NV66 732 aaKnown RBP4.09□□□□□ -1.75
MCF2-202ENST00000370573 MAD2L2Q9UI95 211 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 ZBTB21Q9ULJ3 1066 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 PPP2R3BQ9Y5P8 575 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 CSADQ9Y600 493 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 BAZ2BQ9UIF8 2168 aaKnown RBP4.09□□□□□ -1.76
MCF2-202ENST00000370573 B2RBV5 119 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 RNGTTO60942 597 aaKnown RBP4.08□□□□□ -1.76
MCF2-202ENST00000370573 SLFN14P0C7P3 912 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 CALM1P0DP23 149 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 CALM2P0DP24 149 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 CALM3P0DP25 149 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 SNHG28P0DPA3 235 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 VEGFAP15692 232 aaPredicted RBP4.08□□□□□ -1.76
MCF2-202ENST00000370573 IFNAR1P17181 557 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 SYT1P21579 422 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 GRIK1P39086 918 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ECE1P42892 770 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 LMNB2Q03252 620 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ICA1Q05084 483 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 PRKG1Q13976 671 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 SUPT20HL1Q3ZLR7 823 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 OTUD7BQ6GQQ9 843 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 TMTC3Q6ZXV5 915 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 MOB2Q70IA6 237 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ZNF765Q7L2R6 523 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ZKSCAN4Q969J2 545 aaPredicted RBP4.08□□□□□ -1.76
MCF2-202ENST00000370573 CDCA5Q96FF9 252 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 NECAB3Q96P71 396 aaPredicted RBP4.08□□□□□ -1.76
MCF2-202ENST00000370573 FANCD2OSQ96PS1 177 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ZNF341Q9BYN7 854 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 CPVLQ9H3G5 476 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 CABP5Q9NP86 173 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 GJB4Q9NTQ9 266 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ORC3Q9UBD5 711 aaPredicted RBP4.08□□□□□ -1.76
MCF2-202ENST00000370573 PCDHB5Q9Y5E4 795 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 PTCH2Q9Y6C5 1203 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 hCG_1642624A0A1W2PR95 340 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 TRAF5O00463 557 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 CPLX1O14810 134 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 DHX16O60231 1041 aaKnown RBP4.08□□□□□ -1.76
MCF2-202ENST00000370573 CTNND1O60716 968 aaKnown RBP4.08□□□□□ -1.76
MCF2-202ENST00000370573 GJB6O95452 261 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ASMTLO95671 621 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 PDHBP11177 359 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ARNTP27540 789 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 ID3Q02535 119 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 IFRD2Q12894 506 aaPredicted RBP4.08□□□□□ -1.76
MCF2-202ENST00000370573 CDK5R2Q13319 367 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 MAP7Q14244 749 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 TTLL4Q14679 1199 aa4.08□□□□□ -1.76
MCF2-202ENST00000370573 PPP2R5BQ15173 497 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms