RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 HMGB1P1B2RPK0 211 aaPredicted RBP21.04■□□□□ 0.96
LMO4-202ENST00000370544 TEX33O43247 280 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 TTC4O95801 387 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 KRT39Q6A163 491 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 FBXO38Q6PIJ6 1188 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 SCYL3Q8IZE3 742 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 ZNF512BQ96KM6 892 aaPredicted RBP21.04■□□□□ 0.96
LMO4-202ENST00000370544 SPATA33Q96N06 139 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 HEMGNQ9BXL5 484 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 MRPL4Q9BYD3 311 aaKnown RBP21.04■□□□□ 0.96
LMO4-202ENST00000370544 CSF1RP07333 972 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 CHRNA5P30532 468 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 EPHA7Q15375 998 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 ZNF564Q8TBZ8 553 aaPredicted RBP21.03■□□□□ 0.96
LMO4-202ENST00000370544 NUP85Q9BW27 656 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 MTMR4Q9NYA4 1195 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 OPHN1O60890 802 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 SBK1Q52WX2 424 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 PHF20Q9BVI0 1012 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 SAYSD1Q9NPB0 183 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 PLAAQ9Y263 795 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 INPP5FQ9Y2H2 1132 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 SNX24Q9Y343 169 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 FIS1Q9Y3D6 152 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 CCDC144BQ3MJ40 725 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 GCNAQ96QF7 691 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 JCADQ9P266 1359 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 PRR5LQ6MZQ0 368 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 TTC13Q8NBP0 860 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 PPRC1Q5VV67 1664 aaKnown RBP21.03■□□□□ 0.96
LMO4-202ENST00000370544 TTC36A6NLP5 189 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 TTI1O43156 1089 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 GPD1LQ8N335 351 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 MID2Q9UJV3 735 aa21.03■□□□□ 0.96
LMO4-202ENST00000370544 PTPRMP28827 1452 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 TFDP2Q14188 446 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 STRIP1Q5VSL9 837 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 HAUS8Q9BT25 410 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 TTC26A0AVF1 554 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 WDR91A4D1P6 747 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 M0QYV0 167 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 EYA4O95677 639 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 KCNB1Q14721 858 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 TUFT1Q9NNX1 390 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 CA4P22748 312 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 GNA15P30679 374 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 ARL4CP56559 192 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 VPS72Q15906 364 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 IGDCC4Q8TDY8 1250 aa21.02■□□□□ 0.96
LMO4-202ENST00000370544 EN1Q05925 392 aaPredicted RBP21.02■□□□□ 0.95
LMO4-202ENST00000370544 PDIA5Q14554 519 aa21.02■□□□□ 0.95
LMO4-202ENST00000370544 ZNF449Q6P9G9 518 aa21.02■□□□□ 0.95
LMO4-202ENST00000370544 SLC9A2Q9UBY0 812 aa21.02■□□□□ 0.95
LMO4-202ENST00000370544 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.02■□□□□ 0.95
LMO4-202ENST00000370544 PCDHA10Q9Y5I2 948 aa21.02■□□□□ 0.95
LMO4-202ENST00000370544 COPB2P35606 906 aa21.01■□□□□ 0.95
LMO4-202ENST00000370544 ZNF543Q08ER8 600 aa21.01■□□□□ 0.95
LMO4-202ENST00000370544 METTL16Q86W50 562 aaKnown RBP21.01■□□□□ 0.95
LMO4-202ENST00000370544 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
LMO4-202ENST00000370544 CEP55Q53EZ4 464 aa21.01■□□□□ 0.95
LMO4-202ENST00000370544 EXOC4Q96A65 974 aa21.01■□□□□ 0.95
LMO4-202ENST00000370544 A0A1W2PQC6 194 aa21.01■□□□□ 0.95
LMO4-202ENST00000370544 CLEC17AQ6ZS10 378 aa21.01■□□□□ 0.95
LMO4-202ENST00000370544 MICAL1Q8TDZ2 1067 aa21.01■□□□□ 0.95
LMO4-202ENST00000370544 KIF3CO14782 793 aa21■□□□□ 0.95
LMO4-202ENST00000370544 HMGCS2P54868 508 aa21■□□□□ 0.95
LMO4-202ENST00000370544 MTMR2Q13614 643 aa21■□□□□ 0.95
LMO4-202ENST00000370544 FAM133BQ5BKY9 247 aaKnown RBP21■□□□□ 0.95
LMO4-202ENST00000370544 GBP7Q8N8V2 638 aaPredicted RBP21■□□□□ 0.95
LMO4-202ENST00000370544 KIF2CQ99661 725 aa21■□□□□ 0.95
LMO4-202ENST00000370544 PMLP29590 882 aa21■□□□□ 0.95
LMO4-202ENST00000370544 CPSF2Q9P2I0 782 aaKnown RBP21■□□□□ 0.95
LMO4-202ENST00000370544 TRIM49P0CI25 452 aa21■□□□□ 0.95
LMO4-202ENST00000370544 TRIM49CP0CI26 452 aa21■□□□□ 0.95
LMO4-202ENST00000370544 COG7P83436 770 aa21■□□□□ 0.95
LMO4-202ENST00000370544 TSPY1Q01534 308 aa21■□□□□ 0.95
LMO4-202ENST00000370544 DHX38Q92620 1227 aaKnown RBP21■□□□□ 0.95
LMO4-202ENST00000370544 ZNF668Q96K58 619 aaPredicted RBP21■□□□□ 0.95
LMO4-202ENST00000370544 CYFIP1Q7L576 1253 aa21■□□□□ 0.95
LMO4-202ENST00000370544 HAUS6Q7Z4H7 955 aa21■□□□□ 0.95
LMO4-202ENST00000370544 FRMD5Q7Z6J6 570 aa21■□□□□ 0.95
LMO4-202ENST00000370544 EIF4ENIF1Q9NRA8 985 aaKnown RBP21■□□□□ 0.95
LMO4-202ENST00000370544 RBAKQ9NYW8 714 aaPredicted RBP21■□□□□ 0.95
LMO4-202ENST00000370544 ZNRF3Q9ULT6 936 aa21■□□□□ 0.95
LMO4-202ENST00000370544 ADGRG1Q9Y653 693 aa21■□□□□ 0.95
LMO4-202ENST00000370544 SPATA31A1Q5TZJ5 1347 aa21■□□□□ 0.95
LMO4-202ENST00000370544 ZNF746Q6NUN9 644 aaPredicted RBP20.99■□□□□ 0.95
LMO4-202ENST00000370544 PARD3BQ8TEW8 1205 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 NCK2O43639 380 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 FTLP02792 175 aaPredicted RBP20.99■□□□□ 0.95
LMO4-202ENST00000370544 MYBL1P10243 752 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 YWHABP31946 246 aaKnown RBP20.99■□□□□ 0.95
LMO4-202ENST00000370544 SLC12A1Q13621 1099 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 OSBPL9Q96SU4 736 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 TXLNGQ9NUQ3 528 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 KLHL8Q9P2G9 620 aaPredicted RBP20.99■□□□□ 0.95
LMO4-202ENST00000370544 EPS15L1Q9UBC2 864 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 EMSYQ7Z589 1322 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 ATG16L1Q676U5 607 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 ANKRD40Q6AI12 368 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms