RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 ZBED4O75132 1171 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 PCCAP05165 728 aaPredicted RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 CAP2P40123 477 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 ARHGAP25P42331 645 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 LIMK1P53667 647 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 PLIN5Q00G26 463 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 GUCY1B3Q02153 619 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 APOBRQ0VD83 1088 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 PICALMQ13492 652 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 DLGAP5Q15398 846 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 HLFQ16534 295 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 LSMEM1Q8N8F7 131 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 PPP2R3CQ969Q6 453 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 GPATCH1Q9BRR8 931 aaKnown RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 TTPALQ9BTX7 342 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 TSGA10Q9BZW7 698 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 KIF9Q9HAQ2 790 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 NCOA5Q9HCD5 579 aaKnown RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 SRA1Q9HD15 236 aaKnown RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 METTL5Q9NRN9 209 aaKnown RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 KRT82Q9NSB4 513 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 PRELID1Q9Y255 219 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 USP16Q9Y5T5 823 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 UTYO14607 1347 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 TTC41PQ6P2S7 1318 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 A0A0G2JMZ2 1700 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 A0A0G2JLL6 359 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 EME2A4GXA9 379 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 CCDC151A5D8V7 595 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 KRBA1A5PL33 1030 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 SPDYE3A6NKU9 549 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ICMTO60725 284 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 SHOX2O60902 331 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 TBCAO75347 108 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF254O75437 659 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 APBB3O95704 486 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 SLC3A2P08195 630 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 PFKMP08237 780 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 HOXC6P09630 235 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ZSCAN22P10073 491 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 CASTP20810 708 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 FNTAP49354 379 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 GUCY2FP51841 1108 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 NEK2P51955 445 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 SKOR1P84550 965 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 MTMR1Q13613 665 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ELOAQ14241 798 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ANKRD1Q15327 319 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 TPD52L1Q16890 204 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 USH1GQ495M9 461 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 METTL24Q5JXM2 366 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 VPS53Q5VIR6 699 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 KAZNQ674X7 775 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 MFSD6Q6ZSS7 791 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ANKS3Q6ZW76 656 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 PRRT2Q7Z6L0 340 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 HOOK3Q86VS8 718 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 GALNT13Q8IUC8 556 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 RNF168Q8IYW5 571 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 RGL4Q8IZJ4 473 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 POF1BQ8WVV4 589 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ARL8AQ96BM9 186 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 DHTKD1Q96HY7 919 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 RBM41Q96IZ5 413 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF594Q96JF6 807 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 CCDC114Q96M63 670 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 CEP295NLQ96MC4 621 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 NAP1L3Q99457 506 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 CDH19Q9H159 772 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 BHMT2Q9H2M3 363 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 CIDEBQ9UHD4 219 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 DMTF1Q9Y222 760 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 NOSIPQ9Y314 301 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 PHIPQ8WWQ0 1821 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 DOCK2Q92608 1830 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 PHLPP2Q6ZVD8 1323 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 TMEM221A6NGB7 291 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 LRRC10BA6NIK2 292 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 POLR3GO15318 223 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 NCK2O43639 380 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ATP9BO43861 1147 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 KPNA6O60684 536 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 CLASP2O75122 1294 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 HOXD12P35452 270 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 USP11P51784 963 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 EIF4A1P60842 406 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 AP1B1Q10567 949 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 MPP3Q13368 585 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 HIC1Q14526 733 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 PPA1Q15181 289 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 CAPRIN2Q6IMN6 1127 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 IGF2-ASQ6U949 168 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 RAPH1Q70E73 1250 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 TBC1D21Q8IYX1 336 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 GALNT15Q8N3T1 639 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ZBTB38Q8NAP3 1195 aaPredicted RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 ATP11CQ8NB49 1132 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 AFAP1L1Q8TED9 768 aa5.52□□□□□ -1.53
UBE3D-202ENST00000369746 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
UBE3D-202ENST00000369746 MKNK1Q9BUB5 465 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms