RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ARMC2Q8NEN0 867 aa18.85■□□□□ 0.61
CHTOP-203ENST00000368690 RFFLQ8WZ73 363 aa18.85■□□□□ 0.61
CHTOP-203ENST00000368690 EYA3Q99504 573 aa18.85■□□□□ 0.61
CHTOP-203ENST00000368690 O00370 1275 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 DDX3XO00571 662 aaKnown RBP eCLIP18.84■□□□□ 0.614e-10■□□□□ 9.1
CHTOP-203ENST00000368690 KIAA0391O15091 583 aaKnown RBP18.84■□□□□ 0.61
CHTOP-203ENST00000368690 GTF2IP78347 998 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 PPATQ06203 517 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 MFSD14BQ5SR56 506 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 ZDHHC24Q6UX98 284 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 SLC30A5Q8TAD4 765 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 FGFBP2Q9BYJ0 223 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 MTFR1LQ9H019 292 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 HOMER3Q9NSC5 361 aa18.84■□□□□ 0.61
CHTOP-203ENST00000368690 SPDYE3A6NKU9 549 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 VIMP08670 466 aaKnown RBP18.83■□□□□ 0.61
CHTOP-203ENST00000368690 TMEM253P0C7T8 217 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 DPEP1P16444 411 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 NR2F2P24468 414 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 EPHA7Q15375 998 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 CDCA2Q69YH5 1023 aaPredicted RBP18.83■□□□□ 0.61
CHTOP-203ENST00000368690 THOC1Q96FV9 657 aaKnown RBP18.83■□□□□ 0.61
CHTOP-203ENST00000368690 IFT74Q96LB3 600 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 PIGSQ96S52 555 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 PRMT1Q99873 361 aaKnown RBP18.83■□□□□ 0.61
CHTOP-203ENST00000368690 COA1Q9GZY4 146 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 AZI2Q9H6S1 392 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 METTL14Q9HCE5 456 aaKnown RBP18.83■□□□□ 0.61
CHTOP-203ENST00000368690 AGAP1Q9UPQ3 857 aa18.83■□□□□ 0.61
CHTOP-203ENST00000368690 USP15Q9Y4E8 981 aaPredicted RBP18.83■□□□□ 0.61
CHTOP-203ENST00000368690 NOVP48745 357 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 BNIP1Q12981 228 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 MAPK7Q13164 816 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 CNGA2Q16280 664 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 GRIK5Q16478 980 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 FAM133BQ5BKY9 247 aaKnown RBP18.83■□□□□ 0.6
CHTOP-203ENST00000368690 HERC4Q5GLZ8 1057 aaPredicted RBP18.83■□□□□ 0.6
CHTOP-203ENST00000368690 PPP1R18Q6NYC8 613 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 JAMLQ86YT9 394 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 TTLL6Q8N841 843 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 NEDD1Q8NHV4 660 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 ROPN1BQ9BZX4 212 aaPredicted RBP18.83■□□□□ 0.6
CHTOP-203ENST00000368690 DBNDD1Q9H9R9 158 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 ROPN1Q9HAT0 212 aaPredicted RBP18.83■□□□□ 0.6
CHTOP-203ENST00000368690 SIX2Q9NPC8 291 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 ABCF3Q9NUQ8 709 aa18.83■□□□□ 0.6
CHTOP-203ENST00000368690 RPTORQ8N122 1335 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 UBOX5O94941 541 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 LMNB1P20700 586 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 GALCP54803 685 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 PLS1Q14651 629 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 DIXDC1Q155Q3 683 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 NAP1L4Q99733 375 aaKnown RBP18.82■□□□□ 0.6
CHTOP-203ENST00000368690 KANSL2Q9H9L4 492 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 ARHGEF3Q9NR81 526 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 SLC5A4Q9NY91 659 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 MTRF1LQ9UGC7 380 aaKnown RBP18.82■□□□□ 0.6
CHTOP-203ENST00000368690 CORO1CQ9ULV4 474 aaPredicted RBP18.82■□□□□ 0.6
CHTOP-203ENST00000368690 PODXLO00592 558 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 WFS1O76024 890 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 SUN1O94901 812 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 LUC7L3O95232 432 aaKnown RBP18.82■□□□□ 0.6
CHTOP-203ENST00000368690 XRCC5P13010 732 aaKnown RBP18.82■□□□□ 0.6
CHTOP-203ENST00000368690 PPP4CP60510 307 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 SLC29A2Q14542 456 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 DCAF12L1Q5VU92 463 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 HAS1Q92839 578 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 TRIM31Q9BZY9 425 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 CPVLQ9H3G5 476 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 ECT2Q9H8V3 914 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 GOPCQ9HD26 462 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 NR2E1Q9Y466 385 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 L3MBTL1Q9Y468 752 aa18.82■□□□□ 0.6
CHTOP-203ENST00000368690 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 SLC16A3O15427 465 aaKnown RBP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 SMNDC1O75940 238 aaKnown RBP eCLIP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 PLA2G4BP0C869 781 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 CYP11B2P19099 503 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 ALDH5A1P51649 535 aaPredicted RBP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 COPS2P61201 443 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 IFI35P80217 286 aaPredicted RBP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 USP17L2Q6R6M4 530 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 U2AF1L4Q8WU68 220 aaKnown RBP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 ZNF570Q96NI8 536 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 GRHL1Q9NZI5 618 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 TBC1D7Q9P0N9 293 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 PCYOX1Q9UHG3 505 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 MTMR7Q9Y216 660 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 ECM2O94769 699 aaPredicted RBP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 CHRNA3P32297 505 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 SKIV2L2P42285 1042 aaKnown RBP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 PLTPP55058 493 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 PTPROQ16827 1216 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 NAIF1Q69YI7 327 aaPredicted RBP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 GPBP1Q86WP2 473 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 SLC35G2Q8TBE7 412 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 FBXO25Q8TCJ0 367 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 RUNDC3BQ96NL0 473 aa18.81■□□□□ 0.6
CHTOP-203ENST00000368690 DDX25Q9UHL0 483 aaKnown RBP18.81■□□□□ 0.6
CHTOP-203ENST00000368690 TLDC2A0PJX2 215 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms