RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 FAM107BQ9H098 131 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 PGAP2Q9UHJ9 254 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 SALL4Q9UJQ4 1053 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 TMEM59LQ9UK28 342 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 DNAJC12Q9UKB3 198 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 AMFRQ9UKV5 643 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 ANKRD62A6NC57 917 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 K7ENM7 598 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 KCNK3O14649 394 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 KIAA0391O15091 583 aaKnown RBP11.1□□□□□ -0.63
TPM3-209ENST00000368527 CLIC2O15247 247 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 EVI5O60447 810 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 TFRCP02786 760 aaKnown RBP11.1□□□□□ -0.63
TPM3-209ENST00000368527 ACTN1P12814 892 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 CAPN2P17655 700 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 TNFAIP3P21580 790 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 RTP1P59025 263 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 MAPK7Q13164 816 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 MTMR1Q13613 665 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 ZSCAN26Q16670 478 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 SPDYCQ5MJ68 293 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
TPM3-209ENST00000368527 LRIG3Q6UXM1 1119 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 CD302Q8IX05 232 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 SCFD2Q8WU76 684 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 CLEC4DQ8WXI8 215 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 GPRASP2Q96D09 838 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 SH3GL2Q99962 352 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 TMEM39BQ9GZU3 492 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 CARD9Q9H257 536 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 FAM204AQ9H8W3 233 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
TPM3-209ENST00000368527 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 RBM12Q9NTZ6 932 aaKnown RBP11.1□□□□□ -0.63
TPM3-209ENST00000368527 PIM2Q9P1W9 311 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 ZHX1Q9UKY1 873 aaPredicted RBP11.1□□□□□ -0.63
TPM3-209ENST00000368527 PPP1R9AQ9ULJ8 1098 aa11.1□□□□□ -0.63
TPM3-209ENST00000368527 GOLGA6L10A0A0M3HER8 536 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 GOLGA6CA6NDK9 693 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 PHF20L1A8MW92 1017 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 DHX15O43143 795 aaKnown RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 NCK2O43639 380 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 ERLIN2O94905 339 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 HEXIM1O94992 359 aaKnown RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 GGPS1O95749 300 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 SYF2O95926 243 aaKnown RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 FTCDO95954 541 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 GOLGA6DP0CG33 693 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 ITGB5P18084 799 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 CCND2P30279 289 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 RARRES1P49788 294 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 CYP2J2P51589 502 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 VAMP7P51809 220 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 NCKAP1LP55160 1127 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 DRAP1Q14919 205 aaPredicted RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 CFAP58Q5T655 872 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 C11orf63Q6NUN7 778 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 PPP1R2P3Q6NXS1 205 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 ENOSF1Q7L5Y1 443 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 TMC2Q8TDI7 906 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 SYTL5Q8TDW5 730 aaPredicted RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 U2AF1L4Q8WU68 220 aaKnown RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 KCNN1Q92952 543 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 ATP6V0A1Q93050 837 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 SYT11Q9BT88 431 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 FAM129AQ9BZQ8 928 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 ISCUQ9H1K1 167 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 TAF1DQ9H5J8 278 aaPredicted RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 SUGCTQ9HAC7 445 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 KIAA1586Q9HCI6 787 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM3-209ENST00000368527 GOLGA6AQ9NYA3 693 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 DMGDHQ9UI17 866 aaKnown RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 ZHX2Q9Y6X8 837 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
TPM3-209ENST00000368527 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
TPM3-209ENST00000368527 RBBP6Q7Z6E9 1792 aaKnown RBP11.08□□□□□ -0.64
TPM3-209ENST00000368527 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.64
TPM3-209ENST00000368527 DDX3XO00571 662 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM3-209ENST00000368527 WNT10BO00744 389 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 SHOX2O60902 331 aaPredicted RBP11.08□□□□□ -0.64
TPM3-209ENST00000368527 ZC3H11AO75152 810 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM3-209ENST00000368527 MTA2O94776 668 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 GZMAP12544 262 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 ERCC3P19447 782 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 YWHABP31946 246 aaKnown RBP11.08□□□□□ -0.64
TPM3-209ENST00000368527 CXCR5P32302 372 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 GGCXP38435 758 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM3-209ENST00000368527 BAG6P46379 1132 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 GALCP54803 685 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 MFAP3P55082 362 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 CXCL9Q07325 125 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 ZC2HC1CQ53FD0 456 aaPredicted RBP11.08□□□□□ -0.64
TPM3-209ENST00000368527 EMC10Q5UCC4 262 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms