RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 IBSPP21815 317 aaPredicted RBP21.13■□□□□ 0.97
CKS1B-203ENST00000368439 LAMTOR4Q0VGL1 99 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 PTGDRQ13258 359 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 FERMT3Q86UX7 667 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 ECHDC2Q86YB7 292 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 TCP11Q8WWU5 503 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 MTRQ99707 1265 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 INO80BQ9C086 356 aaPredicted RBP21.13■□□□□ 0.97
CKS1B-203ENST00000368439 CHST12Q9NRB3 414 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
CKS1B-203ENST00000368439 THEGQ9P2T0 379 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.13■□□□□ 0.97
CKS1B-203ENST00000368439 BRWD1Q9NSI6 2320 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 PLXNA4Q9HCM2 1894 aa21.12■□□□□ 0.97
CKS1B-203ENST00000368439 A0A0U1RQF3 1178 aa21.12■□□□□ 0.97
CKS1B-203ENST00000368439 DGAT1O75907 488 aa21.12■□□□□ 0.97
CKS1B-203ENST00000368439 FGFR1P11362 822 aa21.12■□□□□ 0.97
CKS1B-203ENST00000368439 ATF7P17544 494 aaPredicted RBP21.12■□□□□ 0.97
CKS1B-203ENST00000368439 SFPQP23246 707 aaKnown RBP eCLIP21.12■□□□□ 0.97
CKS1B-203ENST00000368439 RPA1P27694 616 aa21.12■□□□□ 0.97
CKS1B-203ENST00000368439 ZNF598Q86UK7 904 aaKnown RBP21.12■□□□□ 0.97
CKS1B-203ENST00000368439 MRPL38Q96DV4 380 aaKnown RBP21.12■□□□□ 0.97
CKS1B-203ENST00000368439 TRAIPQ9BWF2 469 aa21.12■□□□□ 0.97
CKS1B-203ENST00000368439 MINDY3Q9H8M7 445 aa21.12■□□□□ 0.97
CKS1B-203ENST00000368439 ATP6V0A4Q9HBG4 840 aa21.12■□□□□ 0.97
CKS1B-203ENST00000368439 GRM6O15303 877 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 ASAP2O43150 1006 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 ARL2P36404 184 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 IL17AQ16552 155 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 ECM1Q16610 540 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 MCTP1Q6DN14 999 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 SRGAP1Q7Z6B7 1085 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 IGSF22Q8N9C0 903 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 ATXN2LQ8WWM7 1075 aaKnown RBP21.11■□□□□ 0.97
CKS1B-203ENST00000368439 C11orf84Q9BUA3 381 aaPredicted RBP21.11■□□□□ 0.97
CKS1B-203ENST00000368439 PLVAPQ9BX97 442 aa21.11■□□□□ 0.97
CKS1B-203ENST00000368439 DBR1Q9UK59 544 aaKnown RBP21.11■□□□□ 0.97
CKS1B-203ENST00000368439 TBKBP1A7MCY6 615 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 SRGAP2CP0DJJ0 459 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 PDIA5Q14554 519 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 RILPL1Q5EBL4 403 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 POTEGQ6S5H5 508 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 ASAP3Q8TDY4 903 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 P2RX5Q93086 422 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 CASD1Q96PB1 797 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 NACC1Q96RE7 527 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 COL25A1Q9BXS0 654 aaPredicted RBP21.1■□□□□ 0.97
CKS1B-203ENST00000368439 CWH43Q9H720 699 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 DACT1Q9NYF0 836 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 HCSTQ9UBK5 93 aa21.1■□□□□ 0.97
CKS1B-203ENST00000368439 H3BQV1 296 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 LAD1O00515 517 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 EOMESO95936 686 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 MUTP22033 750 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 PRPHP41219 470 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 CAMK1Q14012 370 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 MXD4Q14582 209 aaPredicted RBP21.09■□□□□ 0.97
CKS1B-203ENST00000368439 PTPROQ16827 1216 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 NAALADL2Q58DX5 795 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 CLLU1OSQ5K130 101 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 LARP1BQ659C4 914 aaKnown RBP21.09■□□□□ 0.97
CKS1B-203ENST00000368439 LRRC55Q6ZSA7 311 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 CATSPER4Q7RTX7 472 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 IFNLR1Q8IU57 520 aaPredicted RBP21.09■□□□□ 0.97
CKS1B-203ENST00000368439 RNF149Q8NC42 400 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 ERMNQ8TAM6 284 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 TMEM117Q9H0C3 514 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 AGPAT5Q9NUQ2 364 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 TYW1Q9NV66 732 aaKnown RBP21.09■□□□□ 0.97
CKS1B-203ENST00000368439 LRWD1Q9UFC0 647 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 PLAGL2Q9UPG8 496 aa21.09■□□□□ 0.97
CKS1B-203ENST00000368439 CUL9Q8IWT3 2517 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 DLL1O00548 723 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 ITGB1P05556 798 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 GLRA2P23416 452 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 HOXA11P31270 313 aaPredicted RBP21.08■□□□□ 0.97
CKS1B-203ENST00000368439 PHKA2P46019 1235 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 PTENP60484 403 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 ATP2C1P98194 919 aaPredicted RBP21.08■□□□□ 0.97
CKS1B-203ENST00000368439 POU5F1BQ06416 359 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 CAPSQ13938 189 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 ASB2Q96Q27 587 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 LMAN2LQ9H0V9 348 aa21.08■□□□□ 0.97
CKS1B-203ENST00000368439 PIN4Q9Y237 131 aaKnown RBP21.08■□□□□ 0.97
CKS1B-203ENST00000368439 HOXA2O43364 376 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 USO1O60763 962 aaKnown RBP21.07■□□□□ 0.96
CKS1B-203ENST00000368439 DNAJB1P25685 340 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 TFF2Q03403 129 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 SKIV2LQ15477 1246 aaKnown RBP21.07■□□□□ 0.96
CKS1B-203ENST00000368439 TJAP1Q5JTD0 557 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 HAUS3Q68CZ6 603 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 KLHL23Q8NBE8 558 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 SPPL3Q8TCT6 385 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 ALG13Q9NP73 1137 aaKnown RBP21.07■□□□□ 0.96
CKS1B-203ENST00000368439 GPRC5CQ9NQ84 441 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 COG5Q9UP83 839 aa21.07■□□□□ 0.96
CKS1B-203ENST00000368439 ZNF623O75123 536 aa21.06■□□□□ 0.96
CKS1B-203ENST00000368439 CCT6AP40227 531 aaKnown RBP21.06■□□□□ 0.96
CKS1B-203ENST00000368439 MRPS5P82675 430 aaKnown RBP21.06■□□□□ 0.96
CKS1B-203ENST00000368439 TIGD5Q53EQ6 642 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms