RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PDCD2LQ9BRP1 358 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 ACBD3Q9H3P7 528 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 WRAP73Q9P2S5 460 aaPredicted RBP15.3■□□□□ 0.04
USF1-202ENST00000368020 INTUQ9ULD6 942 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 K7ENM7 598 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 CLIC2O15247 247 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 P4HA2O15460 535 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 KRT13P13646 458 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 RARRES1P49788 294 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 MAPK7Q13164 816 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 ITGB3BPQ13352 177 aaPredicted RBP15.29■□□□□ 0.04
USF1-202ENST00000368020 LONRF2Q1L5Z9 754 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 CATSPERGQ6ZRH7 1159 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 INTS8Q75QN2 995 aaKnown RBP15.29■□□□□ 0.04
USF1-202ENST00000368020 IL31RAQ8NI17 732 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 HOMER2Q9NSB8 354 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 CAPN6Q9Y6Q1 641 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 DUSP10Q9Y6W6 482 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 DDX39AO00148 427 aaKnown RBP15.29■□□□□ 0.04
USF1-202ENST00000368020 MOCS3O95396 460 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 TBC1D8O95759 1140 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 CETPP11597 493 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 EIF2AK2P19525 551 aaKnown RBP15.29■□□□□ 0.04
USF1-202ENST00000368020 SLC9A1P19634 815 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 YWHABP31946 246 aaKnown RBP15.29■□□□□ 0.04
USF1-202ENST00000368020 STAT1P42224 750 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 PAFAH1B1P43034 410 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 FMO5P49326 533 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 CASP4P49662 377 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 JAM2P57087 298 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 COG2Q14746 738 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 RGMBQ6NW40 437 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 DPY19L2P1Q6NXN4 242 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 MS4A4AQ96JQ5 239 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 TAAR1Q96RJ0 339 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.29■□□□□ 0.04
USF1-202ENST00000368020 C17orf75Q9HAS0 396 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 HOXC10Q9NYD6 342 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 HDAC6Q9UBN7 1215 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 ADAMTS5Q9UNA0 930 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 TFR2Q9UP52 801 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 AGTPBP1Q9UPW5 1226 aa15.29■□□□□ 0.04
USF1-202ENST00000368020 KIAA1217Q5T5P2 1943 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 DSG3P32926 999 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 NAP1L1P55209 391 aaKnown RBP15.28■□□□□ 0.04
USF1-202ENST00000368020 KCNA1Q09470 495 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 DGKZQ13574 1117 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 MOGSQ13724 837 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 KIAA0753Q2KHM9 967 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
USF1-202ENST00000368020 CCDC181Q5TID7 509 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 SLC30A10Q6XR72 485 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 OTUD6AQ7L8S5 288 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 IRF2BP2Q7Z5L9 587 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 NSUN6Q8TEA1 469 aaKnown RBP15.28■□□□□ 0.04
USF1-202ENST00000368020 OSBPL9Q96SU4 736 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 KCNG1Q9UIX4 513 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 PCDHGC5Q9Y5F6 944 aa15.28■□□□□ 0.04
USF1-202ENST00000368020 ZBTB39O15060 712 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 EXOC3O60645 756 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 RHOXF2BP0C7M4 288 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 SCP2P22307 547 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 ZNF157P51786 506 aaPredicted RBP15.27■□□□□ 0.04
USF1-202ENST00000368020 SMTNP53814 917 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 BFSP1Q12934 665 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 NSMFQ6X4W1 530 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 DAW1Q8N136 415 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 MMGT1Q8N4V1 131 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 LMBR1Q8WVP7 490 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 ATP6V0A1Q93050 837 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 CCDC102AQ96A19 550 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 ATG4CQ96DT6 458 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 MMS19Q96T76 1030 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 RHOXF2Q9BQY4 288 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 TEX13BQ9BXU2 312 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 FUT8Q9BYC5 575 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 STK33Q9BYT3 514 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 MLXIPQ9HAP2 919 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 ADAMTS1Q9UHI8 967 aa15.27■□□□□ 0.04
USF1-202ENST00000368020 ARID2Q68CP9 1835 aa15.27■□□□□ 0.03
USF1-202ENST00000368020 NFASCO94856 1347 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 A0A087X0T9 212 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 A0A0A6YYK5 440 aaPredicted RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 CES2O00748 559 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 MAP2K7O14733 419 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 PMM2O15305 246 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 FAM228BP0C875 321 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 MYCLP12524 364 aaPredicted RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 GTF2BQ00403 316 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 MYL7Q01449 175 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 PTK2Q05397 1052 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 BEND6Q5SZJ8 279 aaPredicted RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 VSIG10LQ86VR7 867 aa15.26■□□□□ 0.03
USF1-202ENST00000368020 NOA1Q8NC60 698 aaKnown RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 CALR3Q96L12 384 aaKnown RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 INPP4AQ96PE3 977 aaPredicted RBP15.26■□□□□ 0.03
USF1-202ENST00000368020 PNKPQ96T60 521 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms