RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 AMIGO3Q86WK7 504 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 VSIG1Q86XK7 387 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 KRT35Q92764 455 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 PWWP2AQ96N64 755 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 AMNQ9BXJ7 453 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 OSBPL7Q9BZF2 842 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 NSRP1Q9H0G5 558 aaKnown RBP11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 METTL14Q9HCE5 456 aaKnown RBP11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 ERVK-5Q9HDB9 667 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 FGFR1OP2Q9NVK5 253 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 PCDHGC5Q9Y5F6 944 aa11.91□□□□□ -0.5
NECTIN4-201ENST00000368012 TCP11X1B4DZS4 312 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 BIRC3Q13489 604 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 ASTE1Q2TB18 679 aaPredicted RBP11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 ARSHQ5FYA8 562 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 ZNF662Q6ZS27 426 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 CPNE8Q86YQ8 564 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 JAMLQ86YT9 394 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 SRRM1Q8IYB3 904 aaKnown RBP11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 RPUSD2Q8IZ73 545 aaKnown RBP11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 SPIRE2Q8WWL2 714 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 ATG4AQ8WYN0 398 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 ZNF653Q96CK0 615 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 BICD1Q96G01 975 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 EIF2AK1Q9BQI3 630 aaKnown RBP11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 VCPKMTQ9H867 229 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 TRIM37O94972 964 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 IFNB1P01574 187 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 DAB2IPQ5VWQ8 1189 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 TMC3Q7Z5M5 1100 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 SLFN12Q8IYM2 578 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 NAP1L3Q99457 506 aaPredicted RBP11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 RIOX1Q9H6W3 641 aa11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 TPX2Q9ULW0 747 aaKnown RBP11.9□□□□□ -0.5
NECTIN4-201ENST00000368012 THAP12O43422 761 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 SERPINB2P05120 415 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 LMNB1P20700 586 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 SOX5P35711 763 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 KIAA1755Q5JYT7 1200 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 PPP4R3AQ6IN85 833 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 ZNF449Q6P9G9 518 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 KAT5Q92993 513 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 RSRC1Q96IZ7 334 aaKnown RBP11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 EDEM3Q9BZQ6 932 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 POLLQ9UGP5 575 aa11.9□□□□□ -0.51
NECTIN4-201ENST00000368012 CLRN2A0PK11 232 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 F5H6K3 240 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 F8VZ95 297 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 TOM1O60784 492 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 MYCLP12524 364 aaPredicted RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 KLRC3Q07444 240 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 ACCSLQ4AC99 568 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 HAUS1Q96CS2 278 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 SAAL1Q96ER3 474 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 GANQ9H2C0 597 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 KCNQ5Q9NR82 932 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 KLHL11Q9NVR0 708 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 AIPL1Q9NZN9 384 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 TTC7AQ9ULT0 858 aaPredicted RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 EMSYQ7Z589 1322 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 IGSF9BQ9UPX0 1349 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 EML1O00423 815 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 CLDN3O15551 220 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 CYP26A1O43174 497 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 GH2P01242 217 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 BCRP11274 1271 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 FNTAP49354 379 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 ITIH3Q06033 890 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 KYNUQ16719 465 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 CBWD6Q4V339 395 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 CBWD3Q5JTY5 395 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 CBWD5Q5RIA9 395 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 UBAP2Q5T6F2 1119 aaKnown RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 MEX3CQ5U5Q3 659 aaKnown RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 NT5DC3Q86UY8 548 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 PRCCQ92733 491 aaPredicted RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 ARHGEF2Q92974 986 aaKnown RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 TEKT1Q969V4 418 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 RBM17Q96I25 401 aaKnown RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 C9orf72Q96LT7 481 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 ERP44Q9BS26 406 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 INTS2Q9H0H0 1204 aaKnown RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 TYW1Q9NV66 732 aaKnown RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 CTNNAL1Q9UBT7 734 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 TMEM150BA6NC51 233 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 TCP10L2B9ZVM9 353 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 FAM86B1E9PN63 330 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 SPAG7O75391 227 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 FAM86B2P0C5J1 330 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 GCFC2P16383 781 aaKnown RBP11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 KRT15P19012 456 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 COMTP21964 271 aa11.89□□□□□ -0.51
NECTIN4-201ENST00000368012 GSCP56915 257 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms