RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ZBTB39O15060 712 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 CFBP00751 764 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 DDR1Q08345 913 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 BYSLQ13895 437 aaKnown RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 PLCB4Q15147 1175 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 EPHA7Q15375 998 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 DOK7Q18PE1 504 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 SLC10A5Q5PT55 438 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 GPATCH4Q5T3I0 446 aaKnown RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 NUGGCQ68CJ6 796 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 EP400NLQ6ZTU2 488 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 UBE2TQ9NPD8 197 aaPredicted RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 DAGLAQ9Y4D2 1042 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 ATXN2Q99700 1313 aaKnown RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 ARAP2Q8WZ64 1704 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 LAMB2P55268 1798 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 PDXKO00764 312 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 SKAP2O75563 359 aaPredicted RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 DRD4P21917 467 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 CDC25CP30307 473 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 SLC12A3P55017 1021 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 MYL7Q01449 175 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 SHROOM1Q2M3G4 852 aaPredicted RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 ODR4Q5SWX8 454 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 SLFN13Q68D06 897 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 CCDC137Q6PK04 289 aaKnown RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 C6orf89Q6UWU4 347 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 ARHGAP27Q6ZUM4 889 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 PALB2Q86YC2 1186 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 BTBD6Q96KE9 485 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 FAM129AQ9BZQ8 928 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 PABPC3Q9H361 631 aaKnown RBP8.84□□□□□ -0.99
CD46-208ENST00000367042 NOD2Q9HC29 1040 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 PCDHA2Q9Y5H9 948 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 ALG6Q9Y672 507 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 MYH1P12882 1939 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 MYH4Q9Y623 1939 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 SNED1Q8TER0 1413 aa8.84□□□□□ -0.99
CD46-208ENST00000367042 FOXO6A8MYZ6 492 aa8.83□□□□□ -1
CD46-208ENST00000367042 GDF11O95390 407 aa8.83□□□□□ -1
CD46-208ENST00000367042 FTLP02792 175 aaPredicted RBP8.83□□□□□ -1
CD46-208ENST00000367042 MARCKSL1P49006 195 aa8.83□□□□□ -1
CD46-208ENST00000367042 RHBDL3P58872 404 aa8.83□□□□□ -1
CD46-208ENST00000367042 TAOK1Q7L7X3 1001 aa8.83□□□□□ -1
CD46-208ENST00000367042 KRT35Q92764 455 aa8.83□□□□□ -1
CD46-208ENST00000367042 SH2D3AQ9BRG2 576 aa8.83□□□□□ -1
CD46-208ENST00000367042 TOM1O60784 492 aa8.83□□□□□ -1
CD46-208ENST00000367042 GSCP56915 257 aaPredicted RBP8.83□□□□□ -1
CD46-208ENST00000367042 UBAP2Q5T6F2 1119 aaKnown RBP8.83□□□□□ -1
CD46-208ENST00000367042 SLC20A1Q8WUM9 679 aa8.83□□□□□ -1
CD46-208ENST00000367042 ALG3Q92685 438 aa8.83□□□□□ -1
CD46-208ENST00000367042 KLHL29Q96CT2 875 aa8.83□□□□□ -1
CD46-208ENST00000367042 NAP1L4Q99733 375 aaKnown RBP8.83□□□□□ -1
CD46-208ENST00000367042 DDX4Q9NQI0 724 aaKnown RBP8.83□□□□□ -1
CD46-208ENST00000367042 ABCF3Q9NUQ8 709 aa8.83□□□□□ -1
CD46-208ENST00000367042 FGFR1OP2Q9NVK5 253 aa8.83□□□□□ -1
CD46-208ENST00000367042 MTUS1Q9ULD2 1270 aa8.83□□□□□ -1
CD46-208ENST00000367042 ROBO3Q96MS0 1386 aa8.83□□□□□ -1
CD46-208ENST00000367042 TCP11X1B4DZS4 312 aa8.83□□□□□ -1
CD46-208ENST00000367042 SMARCA1P28370 1054 aa8.83□□□□□ -1
CD46-208ENST00000367042 PEX19P40855 299 aa8.83□□□□□ -1
CD46-208ENST00000367042 FMO5P49326 533 aa8.83□□□□□ -1
CD46-208ENST00000367042 PTENP60484 403 aa8.83□□□□□ -1
CD46-208ENST00000367042 CETN1Q12798 172 aa8.83□□□□□ -1
CD46-208ENST00000367042 MAPK7Q13164 816 aa8.83□□□□□ -1
CD46-208ENST00000367042 PREPLQ4J6C6 727 aaPredicted RBP8.83□□□□□ -1
CD46-208ENST00000367042 CBWD6Q4V339 395 aa8.83□□□□□ -1
CD46-208ENST00000367042 CBWD3Q5JTY5 395 aa8.83□□□□□ -1
CD46-208ENST00000367042 CBWD5Q5RIA9 395 aa8.83□□□□□ -1
CD46-208ENST00000367042 TRAPPC3LQ5T215 181 aa8.83□□□□□ -1
CD46-208ENST00000367042 ERMARDQ5T6L9 678 aa8.83□□□□□ -1
CD46-208ENST00000367042 TRPM8Q7Z2W7 1104 aa8.83□□□□□ -1
CD46-208ENST00000367042 RPAINQ86UA6 219 aa8.83□□□□□ -1
CD46-208ENST00000367042 PPM1KQ8N3J5 372 aa8.83□□□□□ -1
CD46-208ENST00000367042 ELMO3Q96BJ8 720 aa8.83□□□□□ -1
CD46-208ENST00000367042 STAMBPL1Q96FJ0 436 aa8.83□□□□□ -1
CD46-208ENST00000367042 HES6Q96HZ4 224 aa8.83□□□□□ -1
CD46-208ENST00000367042 EIF2AK1Q9BQI3 630 aaKnown RBP8.83□□□□□ -1
CD46-208ENST00000367042 PLCD4Q9BRC7 762 aa8.83□□□□□ -1
CD46-208ENST00000367042 ZNF219Q9P2Y4 722 aaPredicted RBP8.83□□□□□ -1
CD46-208ENST00000367042 CEP83Q9Y592 693 aa8.83□□□□□ -1
CD46-208ENST00000367042 ASTN1O14525 1302 aa8.83□□□□□ -1
CD46-208ENST00000367042 FOXN3O00409 490 aaPredicted RBP8.82□□□□□ -1
CD46-208ENST00000367042 CES2O00748 559 aa8.82□□□□□ -1
CD46-208ENST00000367042 ATP6V1G2O95670 118 aa8.82□□□□□ -1
CD46-208ENST00000367042 DLATP10515 647 aaKnown RBP8.82□□□□□ -1
CD46-208ENST00000367042 RPL21P46778 160 aaKnown RBP8.82□□□□□ -1
CD46-208ENST00000367042 GCLMP48507 274 aa8.82□□□□□ -1
CD46-208ENST00000367042 NT5C2P49902 561 aa8.82□□□□□ -1
CD46-208ENST00000367042 MARSP56192 900 aaKnown RBP8.82□□□□□ -1
CD46-208ENST00000367042 ACCSLQ4AC99 568 aa8.82□□□□□ -1
CD46-208ENST00000367042 C6orf118Q5T5N4 469 aa8.82□□□□□ -1
CD46-208ENST00000367042 DCAF12L1Q5VU92 463 aa8.82□□□□□ -1
CD46-208ENST00000367042 CAPN12Q6ZSI9 719 aa8.82□□□□□ -1
CD46-208ENST00000367042 SYT2Q8N9I0 419 aaPredicted RBP8.82□□□□□ -1
CD46-208ENST00000367042 C1orf54Q8WWF1 131 aa8.82□□□□□ -1
CD46-208ENST00000367042 RNF25Q96BH1 459 aaPredicted RBP8.82□□□□□ -1
CD46-208ENST00000367042 MTFR1LQ9H019 292 aa8.82□□□□□ -1
CD46-208ENST00000367042 INTS2Q9H0H0 1204 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms