RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 PCDHA1Q9Y5I3 950 aa15.99■□□□□ 0.15
PRKN-204ENST00000366896 CDR1P51861 262 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 SNAP25P60880 206 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 ICA1Q05084 483 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 PTK2Q05397 1052 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 SPIRE1Q08AE8 756 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 PTPROQ16827 1216 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 KNOP1Q1ED39 458 aaKnown RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 Q4G0T1 1027 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 SYT2Q8N9I0 419 aaPredicted RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 ERMNQ8TAM6 284 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 ACTRT1Q8TDG2 376 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 BCAS3Q9H6U6 928 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 METTL14Q9HCE5 456 aaKnown RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 NYAP2Q9P242 653 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 SLC12A6Q9UHW9 1150 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 INTUQ9ULD6 942 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 DOCK1Q14185 1865 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 A0A0A6YYK5 440 aaPredicted RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 GOLGA6L7A0A1B0GV03 622 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 GMNCA6NCL1 334 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 GOLGA6L10A6NI86 522 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 SLC16A3O15427 465 aaKnown RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 EEF2P13639 858 aaKnown RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 TAL1P17542 331 aaPredicted RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 RPA1P27694 616 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 HPDP32754 393 aaPredicted RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 HOXD13P35453 343 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 MAP1SQ66K74 1059 aaPredicted RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 ZNF571Q7Z3V5 609 aaPredicted RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 LDHDQ86WU2 507 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 CATSPER3Q86XQ3 398 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 ETNPPLQ8TBG4 499 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 CCDC114Q96M63 670 aa15.98■□□□□ 0.15
PRKN-204ENST00000366896 ARMCX3Q9UH62 379 aaPredicted RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 DDX20Q9UHI6 824 aaKnown RBP15.98■□□□□ 0.15
PRKN-204ENST00000366896 GTPBP10A4D1E9 387 aaKnown RBP15.97■□□□□ 0.15
PRKN-204ENST00000366896 TMCO5BA8MYB1 307 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 RAD51CO43502 376 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 CTNND1O60716 968 aaKnown RBP15.97■□□□□ 0.15
PRKN-204ENST00000366896 GFPT2O94808 682 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 AFPP02771 609 aaKnown RBP15.97■□□□□ 0.15
PRKN-204ENST00000366896 PABPC4Q13310 644 aaKnown RBP eCLIP15.97■□□□□ 0.15
PRKN-204ENST00000366896 SFR1Q86XK3 245 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 SCFD2Q8WU76 684 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 TAF4BQ92750 862 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 OSBPL7Q9BZF2 842 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 ISCUQ9H1K1 167 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.97■□□□□ 0.15
PRKN-204ENST00000366896 AJAP1Q9UKB5 411 aaPredicted RBP15.97■□□□□ 0.15
PRKN-204ENST00000366896 H0YGN5 161 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 GCOM1H8Y6P7 765 aaPredicted RBP15.97■□□□□ 0.15
PRKN-204ENST00000366896 TRAPPC3O43617 180 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 CALUO43852 315 aaPredicted RBP15.97■□□□□ 0.15
PRKN-204ENST00000366896 USP2O75604 605 aaPredicted RBP15.97■□□□□ 0.15
PRKN-204ENST00000366896 ASNSP08243 561 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 MYZAPP0CAP1 466 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 UCHL3P15374 230 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 GIT2Q14161 759 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 RPS6KA1Q15418 735 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 SNCBQ16143 134 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 PRR16Q569H4 304 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 CYB5D1Q6P9G0 228 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 FUKQ8N0W3 1084 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 LRRC57Q8N9N7 239 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 MAGEC3Q8TD91 643 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 FAM20AQ96MK3 541 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 WRNIP1Q96S55 665 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 REEP2Q9BRK0 252 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 PAPPA2Q9BXP8 1791 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 CENPHQ9H3R5 247 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 NFS1Q9Y697 457 aa15.97■□□□□ 0.15
PRKN-204ENST00000366896 MEIS2O14770 477 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 KIF4AO95239 1232 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 FOSP01100 380 aaPredicted RBP15.96■□□□□ 0.15
PRKN-204ENST00000366896 ECHS1P30084 290 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 HSD17B3P37058 310 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 NPEPPSP55786 919 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 CUL1Q13616 776 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 KCTD19Q17RG1 926 aaPredicted RBP15.96■□□□□ 0.15
PRKN-204ENST00000366896 CCDC50Q8IVM0 306 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 KLHL7Q8IXQ5 586 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 PARP9Q8IXQ6 854 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 GINM1Q9NU53 330 aa15.96■□□□□ 0.15
PRKN-204ENST00000366896 C5orf60A6NFR6 353 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 RSPH10B2B2RC85 870 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 DNM1LO00429 736 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 FLOT1O75955 427 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 RSPH10BP0C881 870 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 SPATA31C1P0DKV0 1188 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 ZBTB48P10074 688 aaPredicted RBP15.96■□□□□ 0.14
PRKN-204ENST00000366896 NF2P35240 595 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 ARHGAP4P98171 946 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 PRKG1Q13976 671 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 NFIL3Q16649 462 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 EXOC3L4Q17RC7 722 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 ANKRD20A8PQ5CZ79 823 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 SLFN11Q7Z7L1 901 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms