RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 AAASQ9NRG9 546 aa10.37□□□□□ -0.75
MRPL55-216ENST00000366744 TMEM161AQ9NX61 479 aa10.37□□□□□ -0.75
MRPL55-216ENST00000366744 WRAP73Q9P2S5 460 aaPredicted RBP10.37□□□□□ -0.75
MRPL55-216ENST00000366744 PCDHB6Q9Y5E3 794 aa10.37□□□□□ -0.75
MRPL55-216ENST00000366744 SRGAP2CP0DJJ0 459 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 XRCC6P12956 609 aaKnown RBP eCLIP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 RPA1P27694 616 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 RARRES1P49788 294 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 LAMTOR4Q0VGL1 99 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 GRB10Q13322 594 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 DRP2Q13474 957 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 CUL4AQ13619 759 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 PDIA5Q14554 519 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 PCBP1Q15365 356 aaKnown RBP eCLIP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 CCDC85BQ15834 202 aaPredicted RBP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 TMEM132AQ24JP5 1023 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 EPC2Q52LR7 807 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 SRGAP1Q7Z6B7 1085 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 FERMT3Q86UX7 667 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 CATSPER3Q86XQ3 398 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 TMEM192Q8IY95 271 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 LRRC43Q8N309 656 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 RNF149Q8NC42 400 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 PIGOQ8TEQ8 1089 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 PRPF31Q8WWY3 499 aaKnown RBP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 RSPH1Q8WYR4 309 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 INTS4Q96HW7 963 aaKnown RBP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 C17orf80Q9BSJ5 609 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 MRPL9Q9BYD2 267 aaKnown RBP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 TMX1Q9H3N1 280 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 ELAC1Q9H777 363 aaKnown RBP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 CHST12Q9NRB3 414 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 LMCD1Q9NZU5 365 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 THEGQ9P2T0 379 aa10.36□□□□□ -0.75
MRPL55-216ENST00000366744 DBR1Q9UK59 544 aaKnown RBP10.36□□□□□ -0.75
MRPL55-216ENST00000366744 CITO14578 2027 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 LRRIQ4A6NIV6 560 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 TBKBP1A7MCY6 615 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 C9IYK1 514 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 INO80B-WBP1J3KQ70 363 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 MGEA5O60502 916 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 ARHGEF15O94989 841 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 RB1P06400 928 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 ATP2C1P98194 919 aaPredicted RBP10.35□□□□□ -0.75
MRPL55-216ENST00000366744 GPM6BQ13491 265 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 ADGRE1Q14246 886 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 PPP2R5AQ15172 486 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 ZRSR1Q15695 479 aaKnown RBP10.35□□□□□ -0.75
MRPL55-216ENST00000366744 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 ARL6IP4Q66PJ3 421 aaKnown RBP10.35□□□□□ -0.75
MRPL55-216ENST00000366744 KSR1Q8IVT5 923 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 ZBTB8OSQ8IWT0 167 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 HACE1Q8IYU2 909 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 PPP2R3CQ969Q6 453 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 CEP89Q96ST8 783 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 PLVAPQ9BX97 442 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 TRIM6Q9C030 488 aaPredicted RBP10.35□□□□□ -0.75
MRPL55-216ENST00000366744 NT5C3AQ9H0P0 336 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 POLR3FQ9H1D9 316 aaPredicted RBP10.35□□□□□ -0.75
MRPL55-216ENST00000366744 PCDHB12Q9Y5F1 795 aa10.35□□□□□ -0.75
MRPL55-216ENST00000366744 NCOR1O75376 2440 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 CARNS1A5YM72 827 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 VWA3AA6NCI4 1184 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 EPOPA6NHQ4 379 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 H3BNC9 293 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 RFXAPO00287 272 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 MED24O75448 989 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 SPATA31C1P0DKV0 1188 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 LAG3P18627 525 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 FGFR4P22455 802 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 PPM1AP35813 382 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 TOB1P50616 345 aaPredicted RBP10.34□□□□□ -0.75
MRPL55-216ENST00000366744 AAK1Q2M2I8 961 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 FAM102BQ5T8I3 360 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 PADI6Q6TGC4 694 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 IGSF22Q8N9C0 903 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 ZNF579Q8NAF0 562 aaKnown RBP10.34□□□□□ -0.75
MRPL55-216ENST00000366744 ZNF689Q96CS4 500 aaPredicted RBP10.34□□□□□ -0.75
MRPL55-216ENST00000366744 PGBD4Q96DM1 585 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 MRPL38Q96DV4 380 aaKnown RBP10.34□□□□□ -0.75
MRPL55-216ENST00000366744 CCDC51Q96ER9 411 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 IFT74Q96LB3 600 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 AK8Q96MA6 479 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 TMEM117Q9H0C3 514 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 C2orf40Q9H1Z8 148 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 RC3H2Q9HBD1 1191 aaKnown RBP10.34□□□□□ -0.75
MRPL55-216ENST00000366744 AGPAT5Q9NUQ2 364 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 DDX19AQ9NUU7 478 aaKnown RBP10.34□□□□□ -0.75
MRPL55-216ENST00000366744 KIAA1024Q9UPX6 916 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 DNM3Q9UQ16 869 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 MTCH2Q9Y6C9 303 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 MRPL42Q9Y6G3 142 aaKnown RBP10.34□□□□□ -0.75
MRPL55-216ENST00000366744 MYO7AQ13402 2215 aa10.34□□□□□ -0.75
MRPL55-216ENST00000366744 REV3LO60673 3130 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 A0A0U1RQF3 1178 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 C5orf67F2Z3F1 127 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 ZBTB39O15060 712 aa10.33□□□□□ -0.76
MRPL55-216ENST00000366744 CSDE1O75534 798 aaKnown RBP10.33□□□□□ -0.76
MRPL55-216ENST00000366744 EOMESO95936 686 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms