RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 IKBKBO14920 756 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 SLC16A4O15374 487 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 GAP43P17677 238 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 NPTX2P47972 431 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 COBLL1Q53SF7 1204 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 MARCH8Q5T0T0 291 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 CXCL17Q6UXB2 119 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 GUF1Q8N442 669 aaKnown RBP13.47□□□□□ -0.25
CAPN9-203ENST00000366666 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
CAPN9-203ENST00000366666 SLC7A3Q8WY07 619 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 UPF3AQ9H1J1 476 aaKnown RBP13.47□□□□□ -0.25
CAPN9-203ENST00000366666 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
CAPN9-203ENST00000366666 DACH1Q9UI36 760 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 PTPN22Q9Y2R2 807 aa13.47□□□□□ -0.25
CAPN9-203ENST00000366666 SCN10AQ9Y5Y9 1956 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 C22orf31O95567 290 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 GLRA2P23416 452 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 CLCN3P51790 818 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 GABPB1Q06547 395 aaPredicted RBP13.46□□□□□ -0.25
CAPN9-203ENST00000366666 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.25
CAPN9-203ENST00000366666 TPD52L1Q16890 204 aaPredicted RBP13.46□□□□□ -0.25
CAPN9-203ENST00000366666 MYOCDQ8IZQ8 938 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 SLAIN1Q8ND83 568 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 CCDC112Q8NEF3 446 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 CACTINQ8WUQ7 758 aaKnown RBP13.46□□□□□ -0.25
CAPN9-203ENST00000366666 P2RX5Q93086 422 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 DRC1Q96MC2 740 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 STRA6Q9BX79 667 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 KCTD10Q9H3F6 313 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 ZNF215Q9UL58 517 aaPredicted RBP13.46□□□□□ -0.25
CAPN9-203ENST00000366666 USP20Q9Y2K6 914 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 ZMYM2Q9UBW7 1377 aa13.46□□□□□ -0.25
CAPN9-203ENST00000366666 IGKV6-21A0A0C4DH24 114 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 CCDC169A6NNP5 214 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 K7ENM7 598 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 PSMA7O14818 248 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 PPP1R37O75864 691 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 CCNE1P24864 410 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 KLRC1P26715 233 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 ARL2P36404 184 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 ZNF200P98182 395 aaPredicted RBP13.45□□□□□ -0.26
CAPN9-203ENST00000366666 MFSD10Q14728 455 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 LHX8Q68G74 356 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 CENPPQ6IPU0 288 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 MCPH1Q8NEM0 835 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 DHTKD1Q96HY7 919 aaPredicted RBP13.45□□□□□ -0.26
CAPN9-203ENST00000366666 C16orf45Q96MC5 204 aaPredicted RBP13.45□□□□□ -0.26
CAPN9-203ENST00000366666 LARSQ9P2J5 1176 aaKnown RBP13.45□□□□□ -0.26
CAPN9-203ENST00000366666 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
CAPN9-203ENST00000366666 TISP43B9A030 160 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 HAS3O00219 553 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 RFC5P40937 340 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 PSEN2P49810 448 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 PPFIA1Q13136 1202 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 ARHGEF6Q15052 776 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 MTFR1Q15390 333 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 GRIK4Q16099 956 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 KCNA10Q16322 511 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 ZCWPW2Q504Y3 356 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 EFCAB12Q6NXP0 572 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 IRF2BP1Q8IU81 584 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 METTL13Q8N6R0 699 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 ZNF507Q8TCN5 953 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 LMBR1Q8WVP7 490 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 PRPF31Q8WWY3 499 aaKnown RBP13.45□□□□□ -0.26
CAPN9-203ENST00000366666 KIFAP3Q92845 792 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 PPP1R16BQ96T49 567 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 KCND1Q9NSA2 647 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 SEL1LQ9UBV2 794 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 SIP14410 1827 aa13.45□□□□□ -0.26
CAPN9-203ENST00000366666 TGFB1I1O43294 461 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 SMIM10L2AP0DMW4 78 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 SMIM10L2BP0DMW5 78 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 HSPA8P11142 646 aaKnown RBP13.44□□□□□ -0.26
CAPN9-203ENST00000366666 NCKAP1LP55160 1127 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 STIM1Q13586 685 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 CAPSQ13938 189 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 SPATA1Q5VX52 437 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 CCSAPQ6IQ19 270 aaPredicted RBP13.44□□□□□ -0.26
CAPN9-203ENST00000366666 HAUS6Q7Z4H7 955 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 TMEM161BQ8NDZ6 487 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 KLHDC9Q8NEP7 349 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 TIPINQ9BVW5 301 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 ASGR1P07306 291 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 ZNF18P17022 549 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 LBX1P52954 281 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 PRMT2P55345 433 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 DMP1Q13316 513 aaPredicted RBP13.44□□□□□ -0.26
CAPN9-203ENST00000366666 KNOP1Q1ED39 458 aaKnown RBP13.44□□□□□ -0.26
CAPN9-203ENST00000366666 ZNF484Q5JVG2 852 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 CEP135Q66GS9 1140 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 MTHFD1LQ6UB35 978 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 TAS1R3Q7RTX0 852 aa13.44□□□□□ -0.26
CAPN9-203ENST00000366666 EDN1P05305 212 aa13.43□□□□□ -0.26
CAPN9-203ENST00000366666 NKX3-2P78367 333 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms