RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IL9P15248 144 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 UBE3AQ05086 875 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 DLX2Q07687 328 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CLLU1OSQ5K130 101 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PTCRAQ6ISU1 281 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 KSR1Q8IVT5 923 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 COLGALT1Q8NBJ5 622 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 KHSRPQ92945 711 aaKnown RBP eCLIP15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LLPHQ9BRT6 129 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CLDND1Q9NY35 253 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PCDHB12Q9Y5F1 795 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 HOXA2O43364 376 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 IBSPP21815 317 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 YWHABP31946 246 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 RFC5P40937 340 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CTTNQ14247 550 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CSPP1Q1MSJ5 1256 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 NCAPH2Q6IBW4 605 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ADGRD2Q7Z7M1 963 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 RHPN2Q8IUC4 686 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 EXOC8Q8IYI6 725 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PRPF31Q8WWY3 499 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CEP170P1Q96L14 293 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 INO80BQ9C086 356 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 AAASQ9NRG9 546 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 DACT1Q9NYF0 836 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PCDHA12Q9UN75 941 aa15.3■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ARID2Q68CP9 1835 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 FSCN2O14926 492 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LINC01565O15544 149 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 TBX10O75333 385 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 FGF18O76093 207 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LAG3P18627 525 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SFPQP23246 707 aaKnown RBP eCLIP15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PHKA2P46019 1235 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 RBM25P49756 843 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PLCB3Q01970 1234 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CALCRLQ16602 461 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 EFHBQ8N7U6 833 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SLC7A3Q8WY07 619 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 MSLNLQ96KJ4 702 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SCLT1Q96NL6 688 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 EIF2AK1Q9BQI3 630 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 TTC12Q9H892 705 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 XPNPEP1Q9NQW7 623 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LZTS1Q9Y250 596 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 COL4A3BPQ9Y5P4 624 aa15.29■□□□□ 0.04
TNFRSF1A-202ENST00000366159 GAS2O43903 313 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 MARCH6O60337 910 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 NEMFO60524 1076 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ZNF623O75123 536 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ERVFC1P60507 584 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 TRIM29Q14134 588 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 OTUD6AQ7L8S5 288 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CCDC83Q8IWF9 413 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 TMEM143Q96AN5 459 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ZSCAN31Q96LW9 406 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 TMEM60Q9H2L4 133 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 MINDY3Q9H8M7 445 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CLEC1BQ9P126 229 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PCDHGC5Q9Y5F6 944 aa15.28■□□□□ 0.04
TNFRSF1A-202ENST00000366159 C19orf67A6NJJ6 358 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ASAP2O43150 1006 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 EYA4O95677 639 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 GLP2RO95838 553 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 HOXA11P31270 313 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 FOSBP53539 338 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 POLGP54098 1239 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LAMTOR4Q0VGL1 99 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 KCNC3Q14003 757 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 EMC2Q15006 297 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SMAD2Q15796 467 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 XKR9Q5GH70 373 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SPOUT1Q5T280 376 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 KCNT2Q6UVM3 1135 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SRGAP1Q7Z6B7 1085 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 TPH2Q8IWU9 490 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LRRC43Q8N309 656 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 FBXO18Q8NFZ0 1043 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 HELQQ8TDG4 1101 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PSPC1Q8WXF1 523 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 RSPH1Q8WYR4 309 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 MRPS27Q92552 414 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 NLRP4Q96MN2 994 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 IGFLR1Q9H665 355 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 EPHX3Q9H6B9 360 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 TLR9Q9NR96 1032 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ANKEF1Q9NU02 776 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PI4K2BG5E9Z4 385 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MBTPS2O43462 519 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 CSPG5O95196 566 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SPATA31C1P0DKV0 1188 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TXKP42681 527 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 GUCY1B3Q02153 619 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 POU5F1BQ06416 359 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PDE12Q6L8Q7 609 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 CATSPER4Q7RTX7 472 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms