RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 BMP8AQ7Z5Y6 402 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 ANKRD53Q8N9V6 530 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 GCDHQ92947 438 aaPredicted RBP6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 WDR92Q96MX6 357 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 FAM126AQ9BYI3 521 aaPredicted RBP6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 PITHD1Q9GZP4 211 aaPredicted RBP6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 PRDM12Q9H4Q4 367 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 CAAP1Q9H8G2 361 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 POLR3BQ9NW08 1133 aaPredicted RBP6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 VWA7Q9Y334 891 aa6.44□□□□□ -1.38
RNU4-28P-201ENST00000364739 SLC26A4O43511 780 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 RAB11FIP3O75154 756 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 BPIFB4P59827 614 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 PHC1P78364 1004 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 FOXL1Q12952 345 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 DHCR24Q15392 516 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 TAF7LQ5H9L4 462 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 EGFLAMQ63HQ2 1017 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 LHFPL2Q6ZUX7 228 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 HDGFL2Q7Z4V5 671 aaPredicted RBP6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 CMIPQ8IY22 773 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 TTC9BQ8N6N2 239 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 SHCBP1Q8NEM2 672 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 DVL3Q92997 716 aaPredicted RBP6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 FERMT2Q96AC1 680 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 TTC1Q99614 292 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 IFT22Q9H7X7 185 aa6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 NOC2LQ9Y3T9 749 aaKnown RBP6.43□□□□□ -1.38
RNU4-28P-201ENST00000364739 GOLGA8BA8MQT2 603 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 KDM1AO60341 852 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 MSX2P35548 267 aaPredicted RBP6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 TCIRG1Q13488 830 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 RIN1Q13671 783 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 PUM1Q14671 1186 aaKnown RBP eCLIP6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 PDCD1Q15116 288 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 CT47A1Q5JQC4 288 aaPredicted RBP6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 GPR158Q5T848 1215 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 Q6ZSN1 163 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 SPRED1Q7Z699 444 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 CLEC14AQ86T13 490 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 CXorf67Q86X51 503 aaPredicted RBP6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 PLA2G15Q8NCC3 412 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 CLRN3Q8NCR9 226 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 CHAC2Q8WUX2 184 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 GFM2Q969S9 779 aaKnown RBP6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 ADOQ96SZ5 270 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 GPHA2Q96T91 129 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 HAPLN2Q9GZV7 340 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 VTA1Q9NP79 307 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 TOPORSQ9NS56 1045 aaPredicted RBP6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 PLA2G3Q9NZ20 509 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 EDARQ9UNE0 448 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 PPP2R3BQ9Y5P8 575 aa6.42□□□□□ -1.38
RNU4-28P-201ENST00000364739 RAD17O75943 681 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 TOX4O94842 621 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 CLSTN1O94985 981 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 LPLP06858 475 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 ACO1P21399 889 aaKnown RBP6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 CD69Q07108 199 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 GRM7Q14831 915 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 CT83Q5H943 113 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 CCDC62Q6P9F0 684 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 FRMD7Q6ZUT3 714 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 SH3RF3Q8TEJ3 882 aaPredicted RBP6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 SLC7A6OSQ96CW6 309 aaPredicted RBP6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 SLC6A15Q9H2J7 730 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 TMPRSS11EQ9UL52 423 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 SYNPO2Q9UMS6 1093 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 MYRFQ9Y2G1 1151 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 TCAF1Q9Y4C2 921 aa6.41□□□□□ -1.38
RNU4-28P-201ENST00000364739 DAPK3O43293 454 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 PFKMP08237 780 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 COMTP21964 271 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 CNGA1P29973 690 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 SOX5P35711 763 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 MANFP55145 182 aaKnown RBP6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 SESN2P58004 480 aaPredicted RBP6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 ADAM8P78325 824 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 TRIM25Q14258 630 aaKnown RBP6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 R3HDM1Q15032 1099 aaKnown RBP6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 RASSF3Q86WH2 238 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 LYSMD2Q8IV50 215 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 AFAP1L2Q8N4X5 818 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 GAB3Q8WWW8 586 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 RABGGTAQ92696 567 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 HIST1H2AHQ96KK5 128 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 HIST1H2AJQ99878 128 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 FDXACB1Q9BRP7 624 aaPredicted RBP6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 USP36Q9P275 1121 aaKnown RBP6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 NCDNQ9UBB6 729 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 PCDHB6Q9Y5E3 794 aa6.4□□□□□ -1.38
RNU4-28P-201ENST00000364739 ST20-MTHFSA0A0A6YYL1 179 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 A0A1W2PRX2 142 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 UBE2QL1A1L167 161 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 ZEB2O60315 1214 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 RPS19P39019 145 aaKnown RBP6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 SPDYAQ5MJ70 313 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms