RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MIF4GDA9UHW6 222 aaKnown RBP14.93□□□□□ -0.02
COL6A1-201ENST00000361866 TULP2O00295 520 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 GH2P01242 217 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 PDHBP11177 359 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 ITIH3Q06033 890 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 IL17AQ16552 155 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 SBK1Q52WX2 424 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 JAMLQ86YT9 394 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 MRPL11Q9Y3B7 192 aaKnown RBP14.93□□□□□ -0.02
COL6A1-201ENST00000361866 EMSYQ7Z589 1322 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 FANCGO15287 622 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 OPHN1O60890 802 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 CAND2O75155 1236 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 NTSR2O95665 410 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 SERPINB2P05120 415 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 CASP4P49662 377 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 IRX4P78413 519 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 SYDE2Q5VT97 1194 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 IRF2BP1Q8IU81 584 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 MTRQ99707 1265 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 ALG13Q9NP73 1137 aaKnown RBP14.93□□□□□ -0.02
COL6A1-201ENST00000361866 BRD2P25440 801 aaKnown RBP14.92□□□□□ -0.02
COL6A1-201ENST00000361866 FBXO25Q8TCJ0 367 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 ACCSQ96QU6 501 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 CYTH2Q99418 400 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 MXD3Q9BW11 206 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 MTMR4Q9NYA4 1195 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 MAD1L1Q9Y6D9 718 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 RSPH10B2B2RC85 870 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 RSPH10BP0C881 870 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 CHRNA3P32297 505 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 BASP1P80723 227 aaKnown RBP14.92□□□□□ -0.02
COL6A1-201ENST00000361866 LRRC34Q8IZ02 419 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 SAAL1Q96ER3 474 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 TXLNGQ9NUQ3 528 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 ALG6Q9Y672 507 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 ENO4A6NNW6 628 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 CLDN3O15551 220 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 LUC7L3O95232 432 aaKnown RBP14.92□□□□□ -0.02
COL6A1-201ENST00000361866 PRLRP16471 622 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 CD58P19256 250 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 POLD1P28340 1107 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 ERVK-9P63128 1117 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 SEMA3FQ13275 785 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 KYNUQ16719 465 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 FIGNQ5HY92 759 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 SLC30A10Q6XR72 485 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 SEPT14Q6ZU15 432 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 EPM2AIP1Q7L775 607 aaPredicted RBP14.92□□□□□ -0.02
COL6A1-201ENST00000361866 FRMD5Q7Z6J6 570 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 C11orf70Q9BRQ4 267 aa14.92□□□□□ -0.02
COL6A1-201ENST00000361866 CYP26A1O43174 497 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 PIK3CAP42336 1068 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 MEA1Q16626 185 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 PHLDB3Q6NSJ2 640 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 GBP7Q8N8V2 638 aaPredicted RBP14.91□□□□□ -0.02
COL6A1-201ENST00000361866 TPCN2Q8NHX9 752 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 FERMT1Q9BQL6 677 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 ERP44Q9BS26 406 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 PHBP35232 272 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 PBX1P40424 430 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 TRPM8Q7Z2W7 1104 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 ZNF571Q7Z3V5 609 aaPredicted RBP14.91□□□□□ -0.02
COL6A1-201ENST00000361866 DEPTORQ8TB45 409 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 LRRC37BQ96QE4 947 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 EIF2AK1Q9BQI3 630 aaKnown RBP14.91□□□□□ -0.02
COL6A1-201ENST00000361866 MYO5BQ9ULV0 1848 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 CCT8L1PA6NM43 557 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 F5H6K3 240 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 INHBAP08476 426 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 PLS3P13797 630 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 KLRC3Q07444 240 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 FBXO33Q7Z6M2 555 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 BBOF1Q8ND07 529 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 ZNF507Q8TCN5 953 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 RUBCNQ92622 972 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 WDR11Q9BZH6 1224 aa14.91□□□□□ -0.02
COL6A1-201ENST00000361866 SLC16A4O15374 487 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 KRT1P04264 644 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 EIF2AK2P19525 551 aaKnown RBP14.9□□□□□ -0.02
COL6A1-201ENST00000361866 ITPK1Q13572 414 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 MIGA2Q7L4E1 593 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 VGLL2Q8N8G2 317 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 HIPK4Q8NE63 616 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 SPATA20Q8TB22 786 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 KMT5AQ9NQR1 393 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 IL17RBQ9NRM6 502 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 FAM187AA6NFU0 413 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 PDXKO00764 312 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 CYTH3O43739 400 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 PSMC4P43686 418 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 KRT17Q04695 432 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 PRKG1Q13976 671 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 BRDTQ58F21 947 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-201ENST00000361866 LRIG3Q6UXM1 1119 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 TTC17Q96AE7 1141 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 TMBIM4Q9HC24 238 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 TNS3Q68CZ2 1445 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 ZNF233A6NK53 670 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 MAPK13O15264 365 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms